RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 RBM12Q9NTZ6 932 aaKnown RBP23.19■■□□□ 1.3
CBWD3-213ENST00000618217 SHROOM3Q8TF72 1996 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 TCRBV7S2A1N4TA0A589 114 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 ARHGAP42A6NI28 874 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 TNFRSF10AO00220 468 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 TJP3O95049 919 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 CD160O95971 181 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 DLDP09622 509 aaKnown RBP23.18■■□□□ 1.3
CBWD3-213ENST00000618217 HNRNPLP14866 589 aaKnown RBP eCLIP23.18■■□□□ 1.3
CBWD3-213ENST00000618217 PECAM1P16284 738 aaPredicted RBP23.18■■□□□ 1.3
CBWD3-213ENST00000618217 TGM2P21980 687 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 ECT2LQ008S8 904 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 SULT2A1Q06520 285 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 DGKKQ5KSL6 1271 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 ARHGAP36Q6ZRI8 547 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 SLC13A5Q86YT5 568 aaPredicted RBP23.18■■□□□ 1.3
CBWD3-213ENST00000618217 PJA1Q8NG27 643 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 KCNV2Q8TDN2 545 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 CYB5D2Q8WUJ1 264 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 CLDN23Q96B33 292 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 MYO19Q96H55 970 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 OLFM3Q96PB7 478 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 OSBPL9Q96SU4 736 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 NAPGQ99747 312 aaPredicted RBP23.18■■□□□ 1.3
CBWD3-213ENST00000618217 THAP10Q9P2Z0 257 aaPredicted RBP23.18■■□□□ 1.3
CBWD3-213ENST00000618217 HEY1Q9Y5J3 304 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 RAD54BQ9Y620 910 aa23.18■■□□□ 1.3
CBWD3-213ENST00000618217 CXorf51AA0A1B0GTR3 108 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 CTAGE9A4FU28 777 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 CBX4O00257 560 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 DFFAO00273 331 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 MAP3K6O95382 1288 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 ASLP04424 464 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 ATP5BP06576 529 aaKnown RBP23.17■■□□□ 1.3
CBWD3-213ENST00000618217 PRLRP16471 622 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 NR2C2P49116 596 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 VASPP50552 380 aaPredicted RBP23.17■■□□□ 1.3
CBWD3-213ENST00000618217 ARF5P84085 180 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 SEL1L2Q5TEA6 688 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 EGFLAMQ63HQ2 1017 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 CWF19L1Q69YN2 538 aaKnown RBP23.17■■□□□ 1.3
CBWD3-213ENST00000618217 CCDC105Q8IYK2 499 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 CCDC33Q8N5R6 958 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 USP33Q8TEY7 942 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 COG1Q8WTW3 980 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 PBKQ96KB5 322 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 C16orf45Q96MC5 204 aaPredicted RBP23.17■■□□□ 1.3
CBWD3-213ENST00000618217 LMAN1LQ9HAT1 526 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 PDFQ9HBH1 243 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 RRAGDQ9NQL2 400 aaPredicted RBP23.17■■□□□ 1.3
CBWD3-213ENST00000618217 ERVW-1Q9UQF0 538 aa23.17■■□□□ 1.3
CBWD3-213ENST00000618217 APOC4-APOC2K7ER74 178 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 MT-CO1P00395 513 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 APOC2P02655 101 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 ENPP2Q13822 863 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 SYT10Q6XYQ8 523 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 LRRC49Q8IUZ0 686 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 SYNPOQ8N3V7 929 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 RASGEF1CQ8N431 466 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 ACOX2Q99424 681 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 EPHX3Q9H6B9 360 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 HS3ST2Q9Y278 367 aa23.16■■□□□ 1.3
CBWD3-213ENST00000618217 J3KR12 359 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 CES2O00748 559 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 MAFKO60675 156 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 PRAMEF11O60813 436 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 RNF40O75150 1001 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 GARSP41250 739 aaKnown RBP23.15■■□□□ 1.3
CBWD3-213ENST00000618217 STK19P49842 368 aaPredicted RBP23.15■■□□□ 1.3
CBWD3-213ENST00000618217 SEC13P55735 322 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 LINGO4Q6UY18 593 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 UCMAQ8WVF2 138 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 RPL10LQ96L21 214 aaKnown RBP23.15■■□□□ 1.3
CBWD3-213ENST00000618217 TSGA13Q96PP4 275 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 IPO11Q9UI26 975 aaKnown RBP23.15■■□□□ 1.3
CBWD3-213ENST00000618217 SLCO3A1Q9UIG8 710 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 TTC7AQ9ULT0 858 aaPredicted RBP23.15■■□□□ 1.3
CBWD3-213ENST00000618217 HPCAL4Q9UM19 191 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 SIT1Q9Y3P8 196 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 STK25O00506 426 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 CEP104O60308 925 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 SRPRAP08240 638 aaKnown RBP23.15■■□□□ 1.3
CBWD3-213ENST00000618217 MRPS21P82921 87 aaKnown RBP23.15■■□□□ 1.3
CBWD3-213ENST00000618217 LRRC32Q14392 662 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 ZNF234Q14588 700 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 C2orf27AQ580R0 203 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 ZNF513Q8N8E2 541 aaPredicted RBP23.15■■□□□ 1.3
CBWD3-213ENST00000618217 IL17RCQ8NAC3 791 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 KDM1BQ8NB78 822 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 P3H4Q92791 437 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 TMEM245Q9H330 911 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 MFSD1Q9H3U5 465 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 ZDHHC4Q9NPG8 344 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 PLA2G4CQ9UP65 541 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 ACTL7AQ9Y615 435 aa23.15■■□□□ 1.3
CBWD3-213ENST00000618217 ZSCAN5CA6NGD5 496 aaPredicted RBP23.14■■□□□ 1.29
CBWD3-213ENST00000618217 NCAM2O15394 837 aa23.14■■□□□ 1.29
CBWD3-213ENST00000618217 ZNF500O60304 480 aaPredicted RBP23.14■■□□□ 1.29
CBWD3-213ENST00000618217 PEX11BO96011 259 aa23.14■■□□□ 1.29
CBWD3-213ENST00000618217 TCP1P17987 556 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms