RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 CNOT1A5YKK6 2376 aaKnown RBP25.84■■□□□ 1.73
VEGFA-228ENST00000617771 C1QTNF3-AMACRE9PGA6 284 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 ZNF883P0CG24 379 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 SRCP12931 536 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 FERP16591 822 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 ADPRHP54922 357 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 FOXC1Q12948 553 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 HLA-BQ31612 363 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 FILIP1LQ4L180 1135 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 ZNF783Q6ZMS7 281 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 Q6ZVU0 165 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 ADAT2Q7Z6V5 191 aaKnown RBP25.84■■□□□ 1.73
VEGFA-228ENST00000617771 ATP11CQ8NB49 1132 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 C3orf20Q8ND61 904 aa25.84■■□□□ 1.73
VEGFA-228ENST00000617771 NYNRINQ9P2P1 1898 aaKnown RBP25.84■■□□□ 1.73
VEGFA-228ENST00000617771 FARP1Q9Y4F1 1045 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-228ENST00000617771 ASCC3Q8N3C0 2202 aaKnown RBP25.84■■□□□ 1.73
VEGFA-228ENST00000617771 A0A1W2PPC4 97 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 ILVBLA1L0T0 632 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 MCF2LO15068 1137 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 SH3BP5O60239 455 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 SNAP91O60641 907 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 ADRA1BP35368 520 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 CCR5P51681 352 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 RACK1P63244 317 aaKnown RBP25.83■■□□□ 1.73
VEGFA-228ENST00000617771 SIM1P81133 766 aaPredicted RBP25.83■■□□□ 1.73
VEGFA-228ENST00000617771 C1QBPQ07021 282 aaKnown RBP25.83■■□□□ 1.73
VEGFA-228ENST00000617771 NAXDQ8IW45 347 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 ORAI3Q9BRQ5 295 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 IL21RQ9HBE5 538 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 RTN4Q9NQC3 1192 aaKnown RBP25.83■■□□□ 1.73
VEGFA-228ENST00000617771 PPM1HQ9ULR3 514 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 MYO6Q9UM54 1294 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 ANKRD6Q9Y2G4 727 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 PCDHB9Q9Y5E1 797 aa25.83■■□□□ 1.73
VEGFA-228ENST00000617771 NUMA1Q14980 2115 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 A0A0D9SEW6 157 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 SPAARA0A1B0GVQ0 90 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 SLC7A4O43246 635 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 TEX33O43247 280 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 BNIP3LO60238 219 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 GJB6O95452 261 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 DRD3P35462 400 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 CLCN6P51797 869 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 NRG1Q02297 640 aaPredicted RBP25.82■■□□□ 1.72
VEGFA-228ENST00000617771 KIF19Q2TAC6 998 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.82■■□□□ 1.72
VEGFA-228ENST00000617771 MON1BQ7L1V2 547 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 FAM172AQ8WUF8 416 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 CENPIQ92674 756 aaPredicted RBP25.82■■□□□ 1.72
VEGFA-228ENST00000617771 OSBPL2Q9H1P3 480 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 TM7SF3Q9NS93 570 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 OR12D3Q9UGF7 316 aa25.82■■□□□ 1.72
VEGFA-228ENST00000617771 ANKRD62A6NC57 917 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 SIGLEC16A6NMB1 481 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 MT-CO1P00395 513 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 GPD1P21695 349 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 RFC1P35251 1148 aaPredicted RBP25.81■■□□□ 1.72
VEGFA-228ENST00000617771 ZNF165P49910 485 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 RAB6CQ53S08 254 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 ARTNQ5T4W7 220 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 DNAJC24Q6P3W2 148 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 OR7D4Q8NG98 312 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 PIP4K2CQ8TBX8 421 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 FAM131CQ96AQ9 280 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 SKA1Q96BD8 255 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 SPON2Q9BUD6 331 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 RAB6CQ9H0N0 254 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 KDM4CQ9H3R0 1056 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 RETREG1Q9H6L5 497 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 ZNF212Q9UDV6 495 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 SARDHQ9UL12 918 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 FNDC3AQ9Y2H6 1198 aaKnown RBP25.81■■□□□ 1.72
VEGFA-228ENST00000617771 SNX11Q9Y5W9 270 aa25.81■■□□□ 1.72
VEGFA-228ENST00000617771 CACNA1EQ15878 2313 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3DA0A087WVF3 549 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3IA0A087WXS9 549 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3EA0A087X179 549 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3KA0A087X1G2 549 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3FA6NER0 549 aaPredicted RBP25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3LB9A6J9 549 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3HP0C7X1 549 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 RRM1P23921 792 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 C21orf59P57076 290 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3GQ6DHY5 549 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3CQ6IPX1 549 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 RETSATQ6NUM9 610 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 WDR59Q6PJI9 974 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 TBC1D3Q8IZP1 549 aaPredicted RBP25.8■■□□□ 1.72
VEGFA-228ENST00000617771 CAMK1GQ96NX5 476 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 ACE2Q9BYF1 805 aaPredicted RBP25.8■■□□□ 1.72
VEGFA-228ENST00000617771 ATP13A1Q9HD20 1204 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 PCDHGB2Q9Y5G2 931 aa25.8■■□□□ 1.72
VEGFA-228ENST00000617771 CBX4O00257 560 aa25.79■■□□□ 1.72
VEGFA-228ENST00000617771 METAP1P53582 386 aa25.79■■□□□ 1.72
VEGFA-228ENST00000617771 HDAC4P56524 1084 aa25.79■■□□□ 1.72
VEGFA-228ENST00000617771 GNA12Q03113 381 aa25.79■■□□□ 1.72
VEGFA-228ENST00000617771 TRIP6Q15654 476 aaKnown RBP25.79■■□□□ 1.72
VEGFA-228ENST00000617771 MANEALQ5VSG8 457 aa25.79■■□□□ 1.72
VEGFA-228ENST00000617771 RWDD4Q6NW29 188 aaKnown RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms