RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PMEPA1Q969W9 287 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 ZNF347Q96SE7 839 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 SETDB2Q96T68 719 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 RSAD1Q9HA92 442 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 KCNK13Q9HB14 408 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 RUVBL2Q9Y230 463 aaKnown RBP13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 A0A096LPK6 155 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 WDR27A2RRH5 827 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 MPSTP25325 297 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 TCF7P36402 384 aaPredicted RBP13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 GABRB2P47870 512 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 OR2B6P58173 313 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 ILF2Q12905 390 aaKnown RBP13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 CA9Q16790 459 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 COLEC12Q5KU26 742 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 CDHR3Q6ZTQ4 885 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 RFPL4BQ6ZWI9 263 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 FIBCD1Q8N539 461 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 C17orf75Q9HAS0 396 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 PADI4Q9UM07 663 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 VPS4AQ9UN37 437 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 DRG1Q9Y295 367 aaKnown RBP13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 ARPC4-TTLL3A0A0A6YYG9 625 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 SDR42E2A6NKP2 422 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 C12orf71A8MTZ7 269 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 HPCAL1P37235 193 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 OPRL1P41146 370 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 CLCQ05315 142 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 BORAQ6PGQ7 559 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 KCNT2Q6UVM3 1135 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 CMC1Q7Z7K0 106 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 MINDY2Q8NBR6 621 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 CHPT1Q8WUD6 406 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 RASSF5Q8WWW0 418 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 NAA50Q9GZZ1 169 aaKnown RBP13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 CDH19Q9H159 772 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 SOX17Q9H6I2 414 aaPredicted RBP13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 C8orf4Q9NR00 106 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 TMEM94Q12767 1356 aa13.77□□□□□ -0.21
PPP4R3B-205ENST00000616288 BHMG1C9JSJ3 638 aaPredicted RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 EI24O14681 340 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 TOMM70O94826 608 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 SOX6P35712 828 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 MADCAM1Q13477 382 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 NFYCQ13952 458 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 PIWIL3Q7Z3Z3 882 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 KBTBD6Q86V97 674 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 CPNE9Q8IYJ1 553 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 BEST2Q8NFU1 509 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 OR8H1Q8NGG4 311 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 TFB1MQ8WVM0 346 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 MKL1Q969V6 931 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 FAM84BQ96KN1 310 aaPredicted RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 KCTD14Q9BQ13 255 aaPredicted RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 NEURL2Q9BR09 285 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 TEX13BQ9BXU2 312 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 SLC7A5P2Q9GIP4 190 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 SLC38A7Q9NVC3 462 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 GPATCH2LQ9NWQ4 482 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 PAQR5Q9NXK6 330 aaPredicted RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 HESX1Q9UBX0 185 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 POLIQ9UNA4 740 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 CROCCQ5TZA2 2017 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 PNMA8CA0A1B0GUJ8 204 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 I3L521 148 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 FDX1P10109 184 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 KRT20P35900 424 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 NRLP54845 237 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 FAM83EQ2M2I3 478 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 MSS51Q4VC12 460 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 PPM1JQ5JR12 505 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 SNAP47Q5SQN1 464 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 RAP1GAP2Q684P5 730 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 NPNTQ6UXI9 565 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 C12orf56Q8IXR9 622 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 BCAS3Q9H6U6 928 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 HPS4Q9NQG7 708 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 RAD54BQ9Y620 910 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 E5RI56 91 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 CYP7B1O75881 506 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 UFL1O94874 794 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 PRDX6P30041 224 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 CAPRIN1Q14444 709 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 SLC9B1Q4ZJI4 515 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 TTC23LQ6PF05 361 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 PHC2Q8IXK0 858 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 ANKRD13AQ8IZ07 590 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 ZNF420Q8TAQ5 688 aaPredicted RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 CANT1Q8WVQ1 401 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 RNF34Q969K3 372 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 TTYH2Q9BSA4 534 aa13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 RPF2Q9H7B2 306 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-205ENST00000616288 SP140LQ9H930 580 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms