RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FAM71DQ8N9W8 422 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 EFHD2Q96C19 240 aaPredicted RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 PI4K2AQ9BTU6 479 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 TUT1Q9H6E5 874 aaKnown RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 PTPRHQ9HD43 1115 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 SMG5Q9UPR3 1016 aaKnown RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 SMNDC1O75940 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
TCF4-248ENST00000616053 JMJD7P0C870 316 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 SERPINB5P36952 375 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CASP4P49662 377 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 BCAT1P54687 386 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 NFKB2Q00653 900 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CHI3L2Q15782 390 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 ALG1LQ6GMV1 187 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 TNS4Q8IZW8 715 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 DDX43Q9NXZ2 648 aaKnown RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 DRD4P21917 467 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 MUTP22033 750 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CSHL1Q14406 222 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 MILR1Q7Z6M3 343 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 OSBPL2Q9H1P3 480 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 L1RE1Q9UN81 338 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 ASXL2Q76L83 1435 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 MNDAP41218 407 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 ACSM2BQ68CK6 577 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 CXXC5Q7LFL8 322 aaKnown RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 PRSS58Q8IYP2 241 aa12.83□□□□□ -0.36
TCF4-248ENST00000616053 C2orf49Q9BVC5 232 aaPredicted RBP12.83□□□□□ -0.36
TCF4-248ENST00000616053 CLDN4O14493 209 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 ERAL1O75616 437 aaKnown RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 TNFAIP8O95379 198 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 SERPINB8P50452 374 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 CDKL1Q00532 357 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 EPC2Q52LR7 807 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 IRGCQ6NXR0 463 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 METTL3Q86U44 580 aaKnown RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 DEPDC4Q8N2C3 294 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 RBM15Q96T37 977 aaKnown RBP eCLIP12.82□□□□□ -0.36
TCF4-248ENST00000616053 COPAP53621 1224 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 TAF2Q6P1X5 1199 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 ZNF605Q86T29 641 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 FNDC5Q8NAU1 212 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 PIGBQ92521 554 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 QKIQ96PU8 341 aaKnown RBP eCLIP12.82□□□□□ -0.369e-9■■■■□ 19.8
TCF4-248ENST00000616053 OSMRQ99650 979 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 TOR4AQ9NXH8 423 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 LTFP02788 710 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 RBP1P09455 135 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 HDCP19113 662 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 GNALP38405 381 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 PKN1Q16512 942 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 GANQ9H2C0 597 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 TIMM13Q9Y5L4 95 aaPredicted RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 COL15A1P39059 1388 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 HLA-DRAP01903 254 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 PPP2R2AP63151 447 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 AP1S3Q96PC3 154 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 ANKRD34BA5PLL1 514 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 RASGEF1BQ0VAM2 473 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 SF1Q15637 639 aaKnown RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 CCDC33Q8N5R6 958 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 MYRIPQ8NFW9 859 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 PTGFRNQ9P2B2 879 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 SMARCA4P51532 1647 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.82□□□□□ -0.36
TCF4-248ENST00000616053 PLD2O14939 933 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 PLIN3O60664 434 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 CST8O60676 142 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 DGKEP52429 567 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 RFFLQ8WZ73 363 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 ZNF518AQ6AHZ1 1483 aa12.82□□□□□ -0.36
TCF4-248ENST00000616053 PSMD9O00233 223 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 TMEM39BQ9GZU3 492 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 BRF2Q9HAW0 419 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 E2F3O00716 465 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 FSBPO95073 299 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 CSTF2P33240 577 aaKnown RBP eCLIP12.81□□□□□ -0.36
TCF4-248ENST00000616053 SEC13P55735 322 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 VBP1P61758 197 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 FSCN1Q16658 493 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 SLC39A12Q504Y0 691 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 TMC5Q6UXY8 1006 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 ZC3H7AQ8IWR0 971 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 ZCCHC7Q8N3Z6 543 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 OR14C36Q8NHC7 312 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 DNAJB3Q8WWF6 145 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 LMLNQ96KR4 655 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 STRA6Q9BX79 667 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 CSTBP04080 98 aaKnown RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 ARMCX6Q7L4S7 300 aa12.81□□□□□ -0.36
TCF4-248ENST00000616053 TMEM121BQ9BXQ6 578 aaPredicted RBP12.81□□□□□ -0.36
TCF4-248ENST00000616053 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms