RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 APOC4-APOC2K7ER74 178 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 CYB561D2O14569 222 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 MCF2LO15068 1137 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 HLA-DRAP01903 254 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 APOC2P02655 101 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 STAG3L1P0CL83 205 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 CXCL8P10145 99 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 CCDC130P13994 396 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 MLH1P40692 756 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 TUBA4AP68366 448 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 PDAP1Q13442 181 aaKnown RBP22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 TCHHL1Q5QJ38 904 aaPredicted RBP22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 SYCP2LQ5T4T6 812 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 PPP4R1Q8TF05 950 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 ZNF778Q96MU6 729 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 MCEEQ96PE7 176 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 SLC13A1Q9BZW2 595 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 ARHGEF38Q9NXL2 777 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 ZNF701M0R085 212 aaPredicted RBP22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 SLC1A6P48664 564 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 IDH3AP50213 366 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 EIF3EP60228 445 aaKnown RBP22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 PSMD6Q15008 389 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 HADHQ16836 314 aaKnown RBP22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 DCAF4L1Q3SXM0 396 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 CCDC92Q53HC0 331 aaPredicted RBP22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 FASTKD1Q53R41 847 aaKnown RBP22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 TXNRD3NBQ6F5E7 133 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 C16orf59Q7L2K0 433 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 OTOP2Q7RTS6 562 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 NDUFAF2Q8N183 169 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 ITPKCQ96DU7 683 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 CYP4F11Q9HBI6 524 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 RGS18Q9NS28 235 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 KLK14Q9P0G3 267 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 APPL1Q9UKG1 709 aa22.37■■□□□ 1.17
POLR2J3-220ENST00000613744 ENPP3O14638 875 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 MAGEB3O15480 346 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 ZBED1O96006 694 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 SERPINE1P05121 402 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 COX4I1P13073 169 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 RFC2P35250 354 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 OXCT1P55809 520 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 OGDHQ02218 1023 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 FPGSQ05932 587 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 METTL21CQ5VZV1 264 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 RWDD4Q6NW29 188 aaKnown RBP22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 C16orf89Q6UX73 402 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 BRSK2Q8IWQ3 736 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 HIPK4Q8NE63 616 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 RPF1Q9H9Y2 349 aaKnown RBP22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 PTPRJQ12913 1337 aa22.36■■□□□ 1.17
POLR2J3-220ENST00000613744 SORBS2O94875 1100 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 BTG3Q14201 252 aaPredicted RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 CNKSR3Q6P9H4 555 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 IYDQ6PHW0 289 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 TMEM270Q6UE05 265 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 TSPAN14Q8NG11 270 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 DQX1Q8TE96 717 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 CFAP36Q96G28 342 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 FTHL17Q9BXU8 183 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 OXCT2Q9BYC2 517 aaPredicted RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 TSPYL2Q9H2G4 693 aaPredicted RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 POPDC2Q9HBU9 364 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 RRN3Q9NYV6 651 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 MATN2O00339 956 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 ZNF189O75820 626 aaPredicted RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 APOEP02649 317 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 C4BPAP04003 597 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 KDELR1P24390 212 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 YWHAZP63104 245 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 TXNL4AP83876 142 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 SLC25A11Q02978 314 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 GSTM4Q03013 218 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 IKBKEQ14164 716 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 FRMD7Q6ZUT3 714 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 FAM71DQ8N9W8 422 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 ZNF516Q92618 1163 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 NUF2Q9BZD4 464 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 IL23AQ9NPF7 189 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 IGSF9Q9P2J2 1179 aa22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 ZC3H7BQ9UGR2 993 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 TNRC18O15417 2968 aaPredicted RBP22.35■■□□□ 1.17
POLR2J3-220ENST00000613744 A0A0U1RQF3 1178 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 C9IYK1 514 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 FGF3P11487 239 aaPredicted RBP22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 DYNLT1P63172 113 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 SLC24A5Q71RS6 500 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 TMCO2Q7Z6W1 182 aaPredicted RBP22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 TRIM56Q9BRZ2 755 aaKnown RBP22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 VPS45Q9NRW7 570 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 FAM159BA6NKW6 160 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 GLRA3O75311 464 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 RECQL4O94761 1208 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 C8BP07358 591 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 RBP3P10745 1247 aa22.34■■□□□ 1.17
POLR2J3-220ENST00000613744 PSMC3P17980 439 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms