RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 PRDM5Q9NQX1 630 aaPredicted RBP18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 DONSONQ9NYP3 566 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 PPARGC1AQ9UBK2 798 aaKnown RBP18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 SLC38A8A6NNN8 435 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 AP3B1O00203 1094 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 USP12O75317 370 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 IGLV3-27P01718 113 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 PYGBP11216 843 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 RHOQP17081 205 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 ATF6P18850 670 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 CNTFP26441 200 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 SPANXN3Q5MJ09 141 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 RNF43Q68DV7 783 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 MIB1Q86YT6 1006 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 GPATCH11Q8N954 259 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 DNAAF3Q8N9W5 541 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 ZYG11BQ9C0D3 744 aa18.28■□□□□ 0.52
SEMA6C-209ENST00000613223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 ADAM12O43184 909 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 ALADP13716 330 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 ADRA1DP25100 572 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 RING1Q06587 406 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 ACBD5Q5T8D3 534 aaPredicted RBP18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 NAPEPLDQ6IQ20 393 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 UMODL1-AS1Q8N2C9 162 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 LRRC8CQ8TDW0 803 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 USP33Q8TEY7 942 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 GIPC2Q8TF65 315 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 VN1R3Q9BXE9 311 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 UBE2OQ9C0C9 1292 aaKnown RBP18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 AAR2Q9Y312 384 aaKnown RBP18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 RPS6KL1Q9Y6S9 549 aa18.27■□□□□ 0.52
SEMA6C-209ENST00000613223 COL4A6Q14031 1691 aa18.27■□□□□ 0.51
SEMA6C-209ENST00000613223 IGLV3-10A0A075B6K4 115 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 SLC12A8A0AV02 714 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 RFC2P35250 354 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 CCNFP41002 786 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 NPY2RP49146 381 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 NDST2P52849 883 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 MTA1Q13330 715 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 OTOP3Q7RTS5 596 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 LINC00523Q86TU6 105 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 UNC5BQ8IZJ1 945 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 PPP1R2P1Q96PQ5 205 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 FCRL5Q96RD9 977 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 TMEM248Q9NWD8 314 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 SLC17A7Q9P2U7 560 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 ATP11BQ9Y2G3 1177 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 NYNRINQ9P2P1 1898 aaKnown RBP18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 TLR5O60602 858 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 DNAJB2P25686 324 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 OR1D2P34982 312 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 TUFMP49411 452 aaKnown RBP18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 PAPOLAP51003 745 aaKnown RBP18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 KPNA1P52294 538 aaPredicted RBP18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 MGAT5Q09328 741 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 BMPR2Q13873 1038 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 FRG1Q14331 258 aaKnown RBP18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 E2F5Q15329 346 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 ANO4Q32M45 955 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 VWCEQ96DN2 955 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 CDK5RAP1Q96SZ6 601 aaKnown RBP18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 PITPNM3Q9BZ71 974 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 NOL6Q9H6R4 1146 aaKnown RBP18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 GLOD4Q9HC38 313 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 TMEM39AQ9NV64 488 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 MKS1Q9NXB0 559 aa18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.26■□□□□ 0.51
SEMA6C-209ENST00000613223 COPEO14579 308 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 RFPL1O75677 317 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 ANXA9O76027 345 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 RPL17P18621 184 aaKnown RBP18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 ELF1P32519 619 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 KCNJ2P63252 427 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 CCDC15Q0P6D6 951 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 CDH17Q12864 832 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 DNAJC3Q13217 504 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 KIAA1841Q6NSI8 718 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 CGB2Q6NT52 195 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 TIFABQ6ZNK6 161 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 DIS3LQ8TF46 1054 aaKnown RBP18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 CERS2Q96G23 380 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 ZNF419Q96HQ0 510 aaPredicted RBP18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 IL22Q9GZX6 179 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 VPS11Q9H270 941 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 CCSER2Q9H7U1 834 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 ARHGEF3Q9NR81 526 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 UBP1Q9NZI7 540 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 KLHL14Q9P2G3 628 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 IPO11Q9UI26 975 aaKnown RBP18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 GGT7Q9UJ14 662 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 MAGED2Q9UNF1 606 aaPredicted RBP18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 DOCK4Q8N1I0 1966 aa18.25■□□□□ 0.51
SEMA6C-209ENST00000613223 MAGEB16A2A368 324 aa18.24■□□□□ 0.51
SEMA6C-209ENST00000613223 HMX2A2RU54 273 aa18.24■□□□□ 0.51
SEMA6C-209ENST00000613223 USP1O94782 785 aa18.24■□□□□ 0.51
SEMA6C-209ENST00000613223 DHRS4L1P0CG22 281 aa18.24■□□□□ 0.51
SEMA6C-209ENST00000613223 SKIV2L2P42285 1042 aaKnown RBP18.24■□□□□ 0.51
SEMA6C-209ENST00000613223 ETV4P43268 484 aa18.24■□□□□ 0.51
SEMA6C-209ENST00000613223 MROH9Q5TGP6 573 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms