RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 B3GALNT2Q8NCR0 500 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 BHLHE22Q8NFJ8 381 aaPredicted RBP14.32□□□□□ -0.12
COL6A1-207ENST00000612273 LRGUKQ96M69 825 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 PHF12Q96QT6 1004 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 C16orf70Q9BSU1 422 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CDY2AQ9Y6F7 541 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CDY1Q9Y6F8 540 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 ATP6AP2A0A1C7CYW4 349 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 G3V2L1 256 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CCL22O00626 93 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 PMPCBO75439 489 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 ATP6AP2O75787 350 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 ALDH1A2O94788 518 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CNTFP26441 200 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 SERPINB8P50452 374 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 NME5P56597 212 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 MS4A2Q01362 244 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 LAMC2Q13753 1193 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 TLR1Q15399 786 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 TBCCQ15814 346 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 PCSK7Q16549 785 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CMPK2Q5EBM0 449 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 FSCBQ5H9T9 825 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 MARCH8Q5T0T0 291 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 ARHGAP36Q6ZRI8 547 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 GPRIN1Q7Z2K8 1008 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 DSELQ8IZU8 1212 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 ACTRT2Q8TDY3 377 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 HASPINQ8TF76 798 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 EXT2Q93063 718 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 TSNARE1Q96NA8 513 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CPNE1Q99829 537 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CENPKQ9BS16 269 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 SPATA16Q9BXB7 569 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 GRIP2Q9C0E4 1043 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 USP3Q9Y6I4 520 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 TLL2Q9Y6L7 1015 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 A0A1B0GTW7 788 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 C9JVG2 144 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 SLC25A27O95847 323 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CDK7P50613 346 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 FAM91A1Q658Y4 838 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 SLC27A1Q6PCB7 646 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 CYP2R1Q6VVX0 501 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 TMC7Q7Z402 723 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 NR1H4Q96RI1 486 aaPredicted RBP14.32□□□□□ -0.12
COL6A1-207ENST00000612273 NDNQ99608 321 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 PRPF18Q99633 342 aaKnown RBP14.32□□□□□ -0.12
COL6A1-207ENST00000612273 C1orf21Q9H246 121 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 PCDHB12Q9Y5F1 795 aa14.32□□□□□ -0.12
COL6A1-207ENST00000612273 LAMA2P24043 3122 aaKnown RBP14.31□□□□□ -0.12
COL6A1-207ENST00000612273 C15orf38-AP3S2A0A0A6YYH1 394 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 TFEBP19484 476 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 IREB2P48200 963 aaKnown RBP14.31□□□□□ -0.12
COL6A1-207ENST00000612273 SEL1L3Q68CR1 1132 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 ARPINQ7Z6K5 226 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
COL6A1-207ENST00000612273 CDCA5Q96FF9 252 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 SNX27Q96L92 541 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 PCDHAC1Q9H158 963 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 MKS1Q9NXB0 559 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 ZCWPW2A0A1B0GU75 182 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 CCNT2O60583 730 aaKnown RBP14.31□□□□□ -0.12
COL6A1-207ENST00000612273 MOCS2O96007 188 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-207ENST00000612273 CXCR3P49682 368 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 LIMK2P53671 638 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 GRTP1Q5TC63 336 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 OTUD1Q5VV17 481 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-207ENST00000612273 STEAP4Q687X5 459 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 TWF2Q6IBS0 349 aaKnown RBP14.31□□□□□ -0.12
COL6A1-207ENST00000612273 ACMSDQ8TDX5 336 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 GPAMQ9HCL2 828 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 XPR1Q9UBH6 696 aa14.31□□□□□ -0.12
COL6A1-207ENST00000612273 CYP2C9P11712 490 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 CD68P34810 354 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 RALGDSQ12967 914 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 GSTA3Q16772 222 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 PITRM1Q5JRX3 1037 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 TAPT1Q6NXT6 567 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 ARRDC4Q8NCT1 418 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 CENPIQ92674 756 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 NXNL1Q96CM4 212 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 PHF21BQ96EK2 531 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 DCUN1D1Q96GG9 259 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 MLPHQ9BV36 600 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 IL1RL2Q9HB29 575 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 SLC2A6Q9UGQ3 507 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 STAP1Q9ULZ2 295 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 SF3B1O75533 1304 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 C9IYK1 514 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 AURKAO14965 403 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 SETSIPP0DME0 302 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 YBX3P16989 372 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 ADRA1BP35368 520 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 CHRNA4P43681 627 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 GJA9P57773 515 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-207ENST00000612273 PGM2L1Q6PCE3 622 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 EPGNQ6UW88 154 aa14.3□□□□□ -0.12
COL6A1-207ENST00000612273 GK5Q6ZS86 529 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms