RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 RNF220Q5VTB9 566 aa11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 LCLAT1Q6UWP7 414 aa11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 SLC41A1Q8IVJ1 513 aa11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 TMEM86AQ8N2M4 240 aa11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 NIPA2Q8N8Q9 360 aa11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 NTPCRQ9BSD7 190 aaKnown RBP11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 TKTL2Q9H0I9 626 aa11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 PALMDQ9NP74 551 aa11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 MAN1C1Q9NR34 630 aa11.09□□□□□ -0.63
CDC42EP3-206ENST00000611976 MYH6P13533 1939 aa11.08□□□□□ -0.63
CDC42EP3-206ENST00000611976 CFAP99D6REC4 459 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 NPR3P17342 541 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 AKAP5P24588 427 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 AIF1P55008 147 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 OXCT1P55809 520 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 NAA20P61599 178 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 PLD5Q8N7P1 536 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 OR56A4Q8NGH8 313 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 ULBP1Q9BZM6 244 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 TAS2R13Q9NYV9 303 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 CILPO75339 1184 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 CYBBP04839 570 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 LGALS2P05162 132 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 NFKB1P19838 968 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 MATKP42679 507 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 ABCG1P45844 678 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 CCNHP51946 323 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 EPS8Q12929 822 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 TRAF2Q12933 501 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 KLF10Q13118 480 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZNF177Q13360 481 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 DPYSQ14117 519 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 NR6A1Q15406 480 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 SLC5A9Q2M3M2 681 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 LIN52Q52LA3 116 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 PTCD3Q96EY7 689 aaKnown RBP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 OTUB1Q96FW1 271 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 SERPINB11Q96P15 392 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 LGMNQ99538 433 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 RSL24D1Q9UHA3 163 aaKnown RBP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 ANAPC2Q9UJX6 822 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 FARP1Q9Y4F1 1045 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 C2orf71A6NGG8 1288 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 CXCL11O14625 94 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 FAM155BO75949 473 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 SERPINF2P08697 491 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 LBPP18428 481 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 ADSSP30520 456 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 OR1G1P47890 313 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 BNIP2Q12982 314 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 PCBP1Q15365 356 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 DAW1Q8N136 415 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 RNF217Q8TC41 542 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 RAB26Q9ULW5 256 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 AK5Q9Y6K8 562 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 LRP6O75581 1613 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 CNTNAP2Q9UHC6 1331 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 SIN3BO75182 1162 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 TUBP50607 506 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 NEDD8Q15843 81 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 STRADAQ7RTN6 431 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 EID3Q8N140 333 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 FBXO32Q969P5 355 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 QKIQ96PU8 341 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 ATXN10Q9UBB4 475 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 OR12D3Q9UGF7 316 aa11.08□□□□□ -0.64
CDC42EP3-206ENST00000611976 VAV1P15498 845 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 FGFR3P22607 806 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 KLRC2P26717 231 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 EPHA3P29320 983 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 ARL2P36404 184 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 SERPINH1P50454 418 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 KRT33BQ14525 404 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 RRM2BQ7LG56 351 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 LRRC52Q8N7C0 313 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 SETD9Q8NE22 299 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZNF483Q8TF39 744 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 KCTD4Q8WVF5 259 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 FAM120BQ96EK7 910 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 RNF145Q96MT1 663 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 P2RX7Q99572 595 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 ADGRE3Q9BY15 652 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 NIFKQ9BYG3 293 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 CLPBQ9H078 707 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 LMCD1Q9NZU5 365 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 DNAJB4Q9UDY4 337 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PLA2G4CQ9UP65 541 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 AP3M1Q9Y2T2 418 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 MDM4O15151 490 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 RECQL4O94761 1208 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 CCT8P50990 548 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 KPNA1P52294 538 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PLIN5Q00G26 463 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 TMEM132BQ14DG7 1078 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms