RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SH3PXD2AQ5TCZ1 1133 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 FBXL22Q6P050 247 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 LRRC31Q6UY01 552 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 TMC3Q7Z5M5 1100 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 ANKS1BQ7Z6G8 1248 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 C1orf210Q8IVY1 113 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 FIBINQ8TAL6 211 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 UCMAQ8WVF2 138 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 EZH1Q92800 747 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-217ENST00000611848 MAGOHBQ96A72 148 aaKnown RBP9.07□□□□□ -0.96
SMAD4-217ENST00000611848 NTAN1Q96AB6 310 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 ACDQ96AP0 544 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 PKNOX2Q96KN3 472 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 PRICKLE1Q96MT3 831 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-217ENST00000611848 TRIM7Q9C029 511 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 SIK2Q9H0K1 926 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 LRRC19Q9H756 370 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 SPATA6Q9NWH7 488 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-217ENST00000611848 CLEC4EQ9ULY5 219 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 PLAAQ9Y263 795 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 HCN4Q9Y3Q4 1203 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 A0A1B0GVM2 712 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 TCRBV7S2A1N4TA0A589 114 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 TCAF2A6NFQ2 919 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 I6L893 689 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 TRIM24O15164 1050 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 LAMTOR5O43504 91 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 PSTPIP1O43586 416 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 TIMM44O43615 452 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 RNF8O76064 485 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 LUC7L3O95232 432 aaKnown RBP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 KRT14P02533 472 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 HLA-FP30511 346 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 CXCL12P48061 93 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 CCR3P51677 355 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 SKOR1P84550 965 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 OGDHQ02218 1023 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 NRG1Q02297 640 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 MESP2Q0VG99 397 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 SCAPQ12770 1279 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 MTAPQ13126 283 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 CDH18Q13634 790 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 EIF4HQ15056 248 aaKnown RBP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 CCDC137Q6PK04 289 aaKnown RBP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 ZDHHC24Q6UX98 284 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 Q6ZS52 159 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 TRMT11Q7Z4G4 463 aaKnown RBP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 MFN1Q8IWA4 741 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 CFAP52Q8N1V2 620 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 CARNMT1Q8N4J0 409 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 RPLP0P6Q8NHW5 317 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 WFIKKN2Q8TEU8 576 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 USP33Q8TEY7 942 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 MAIP1Q8WWC4 291 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 RPRD1AQ96P16 312 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 FAM129AQ9BZQ8 928 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 IRF2BPLQ9H1B7 796 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 OSBPL2Q9H1P3 480 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 DPH5Q9H2P9 285 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 ANLNQ9NQW6 1124 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 GRHL1Q9NZI5 618 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 KIAA1522Q9P206 1035 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-217ENST00000611848 LCMT1Q9UIC8 334 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 VANGL2Q9ULK5 521 aa9.06□□□□□ -0.96
SMAD4-217ENST00000611848 IGLV3-10A0A075B6K4 115 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ERICH4A6NGS2 130 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 DRGXA6NNA5 263 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 A6NNZ2 444 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 HMGB1P1B2RPK0 211 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 PRRT4C9JH25 899 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 H0Y626 953 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 NPC1O15118 1278 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 CLDN11O75508 207 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 PAPSS2O95340 614 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 TIE1P35590 1138 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 KIR2DL1P43626 348 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 CDH4P55283 916 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 SEC13P55735 322 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 OXCT1P55809 520 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 PIGHQ14442 188 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 TUBB8Q3ZCM7 444 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 RAB6CQ53S08 254 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 EFHC2Q5JST6 749 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 SCYL2Q6P3W7 929 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 CHST9Q7L1S5 443 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 KIAA0907Q7Z7F0 614 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 C14orf80Q86SX3 495 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 RHOT1Q8IXI2 618 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 KATNAL2Q8IYT4 538 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 AHI1Q8N157 1196 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ZNF513Q8N8E2 541 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-217ENST00000611848 IGSF8Q969P0 613 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 MYEOVQ96EZ4 313 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 ATP6V1G3Q96LB4 118 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 FMO2Q99518 471 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 RAB6CQ9H0N0 254 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 RETREG1Q9H6L5 497 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 TMBIM4Q9HC24 238 aa9.05□□□□□ -0.96
SMAD4-217ENST00000611848 PRMT8Q9NR22 394 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms