RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 MRPL10Q7Z7H8 261 aaKnown RBP16.31■□□□□ 0.2
RTN1-209ENST00000611068 ALYREFQ86V81 257 aaKnown RBP16.31■□□□□ 0.2
RTN1-209ENST00000611068 PIGZQ86VD9 579 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 CRYBG2Q8N1P7 616 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 CCDC33Q8N5R6 958 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 ANKRD52Q8NB46 1076 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 PIP4K2CQ8TBX8 421 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 KHSRPQ92945 711 aaKnown RBP eCLIP16.31■□□□□ 0.2
RTN1-209ENST00000611068 FAM149B1Q96BN6 582 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 B3GALT6Q96L58 329 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 RBM15Q96T37 977 aaKnown RBP eCLIP16.31■□□□□ 0.2
RTN1-209ENST00000611068 GPATCH1Q9BRR8 931 aaKnown RBP16.31■□□□□ 0.2
RTN1-209ENST00000611068 MRPS26Q9BYN8 205 aaKnown RBP16.31■□□□□ 0.2
RTN1-209ENST00000611068 GPAMQ9HCL2 828 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 ASIC3Q9UHC3 531 aa16.31■□□□□ 0.2
RTN1-209ENST00000611068 TET1Q8NFU7 2136 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 PRPF4O43172 522 aaKnown RBP eCLIP16.3■□□□□ 0.2
RTN1-209ENST00000611068 GNRH1P01148 92 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 ADRA1DP25100 572 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 ITGA8P53708 1063 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 IFRD2Q12894 506 aaPredicted RBP16.3■□□□□ 0.2
RTN1-209ENST00000611068 KRT81Q14533 505 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 CCDC14Q49A88 953 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 CLLU1OSQ5K130 101 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 ERI1Q8IV48 349 aaKnown RBP16.3■□□□□ 0.2
RTN1-209ENST00000611068 KATNAL2Q8IYT4 538 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 ACTRT2Q8TDY3 377 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 TMIGD2Q96BF3 282 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 TNIP3Q96KP6 325 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 ZFRQ96KR1 1074 aaKnown RBP16.3■□□□□ 0.2
RTN1-209ENST00000611068 PDCD11Q14690 1871 aaKnown RBP16.3■□□□□ 0.2
RTN1-209ENST00000611068 A0A1W2PPM1 405 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 ZNF623O75123 536 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 OR4Q2P0C623 313 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 CCL5P13501 91 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 GPD1P21695 349 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 SLC25A11Q02978 314 aaKnown RBP16.3■□□□□ 0.2
RTN1-209ENST00000611068 KRT17Q04695 432 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 KDSRQ06136 332 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 BST2Q10589 180 aaKnown RBP16.3■□□□□ 0.2
RTN1-209ENST00000611068 GPNMBQ14956 572 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 RASA2Q15283 850 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 TMPRSS6Q8IU80 811 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 PEX5LQ8IYB4 626 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 TTC39CQ8N584 583 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 LZTR1Q8N653 840 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.2
RTN1-209ENST00000611068 KCTD6Q8NC69 237 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 PCED1BQ96HM7 432 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 HGH1Q9BTY7 390 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 OSBPL6Q9BZF3 934 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 USP18Q9UMW8 372 aa16.3■□□□□ 0.2
RTN1-209ENST00000611068 C2CD4BA6NLJ0 364 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 GOLGA8TH3BQL2 631 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 SORBS2O94875 1100 aaKnown RBP16.29■□□□□ 0.2
RTN1-209ENST00000611068 ETS1P14921 441 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 OR1G1P47890 313 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 PITX1P78337 314 aaPredicted RBP16.29■□□□□ 0.2
RTN1-209ENST00000611068 SLC6A3Q01959 620 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 GRAMD1BQ3KR37 738 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 OGFOD2Q6N063 350 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 SPOCD1Q6ZMY3 1216 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 ADGRG6Q86SQ4 1221 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 CPNE9Q8IYJ1 553 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 TOP6BLQ8N6T0 577 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 EXD1Q8NHP7 514 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 TMPRSS4Q9NRS4 437 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 NT5C1B-RDH14C9J2C7 533 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 SPECC1L-ADORA2AF8WAN1 911 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 ITM2AO43736 263 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 ZSCAN5DPP0CG00 497 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 KRT15P19012 456 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 WARSP23381 471 aaKnown RBP16.29■□□□□ 0.2
RTN1-209ENST00000611068 TAP1Q03518 808 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 ARHGEF6Q15052 776 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 FAM26DQ5JW98 314 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 CD300LGQ6UXG3 332 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 SLC26A7Q8TE54 656 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 CEP295NLQ96MC4 621 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 TTC25Q96NG3 672 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 TSEN34Q9BSV6 310 aaKnown RBP16.29■□□□□ 0.2
RTN1-209ENST00000611068 TRIM55Q9BYV6 548 aa16.29■□□□□ 0.2
RTN1-209ENST00000611068 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
RTN1-209ENST00000611068 C9IYK1 514 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 POC1B-GALNT4F8VUJ3 575 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 FKBP6O75344 327 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ENDOUP21128 410 aaKnown RBP16.28■□□□□ 0.2
RTN1-209ENST00000611068 FDFT1P37268 417 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 BCAT1P54687 386 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ARL4CP56559 192 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 ATP1A4Q13733 1029 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 SLC24A5Q71RS6 500 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 AMIGO2Q86SJ2 522 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 CENPSQ8N2Z9 138 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 MARVELD2Q8N4S9 558 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 GLIS1Q8NBF1 620 aa16.28■□□□□ 0.2
RTN1-209ENST00000611068 NETO2Q8NC67 525 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms