RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SERPINB3P29508 390 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 ZBTB16Q05516 673 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 TEDDM1Q5T9Z0 273 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 PIK3R6Q5UE93 754 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 ZNF280DQ6N043 979 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 CCDC91Q7Z6B0 441 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 CMC1Q7Z7K0 106 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 KCNMB4Q86W47 210 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 RTL3Q8N8U3 475 aaKnown RBP13.88□□□□□ -0.19
NEK3-205ENST00000610828 IPMKQ8NFU5 416 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 PPP1R14CQ8TAE6 165 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 AZIN2Q96A70 460 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 C7orf26Q96N11 449 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 RBBP8Q99708 897 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 DCDC2Q9UHG0 476 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 BAIAP2L1Q9UHR4 511 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 MTO1Q9Y2Z2 717 aaKnown RBP13.88□□□□□ -0.19
NEK3-205ENST00000610828 VWA8A3KMH1 1905 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 GOLGA8TH3BQL2 631 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 ENPP3O14638 875 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 NEBLO76041 1014 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 ATP6V1G2O95670 118 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 T-ENOLP0DO92 83 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 KITP10721 976 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 NMBRP28336 390 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 SPRP35270 261 aaPredicted RBP13.88□□□□□ -0.19
NEK3-205ENST00000610828 MLLT6P55198 1093 aaPredicted RBP13.88□□□□□ -0.19
NEK3-205ENST00000610828 TBX4P57082 545 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 EFEMP1Q12805 493 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 FASTKD1Q53R41 847 aaKnown RBP13.88□□□□□ -0.19
NEK3-205ENST00000610828 ARTNQ5T4W7 220 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 ARID3BQ8IVW6 561 aaPredicted RBP13.88□□□□□ -0.19
NEK3-205ENST00000610828 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 ZNF778Q96MU6 729 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 FBXO6Q9NRD1 293 aaPredicted RBP13.88□□□□□ -0.19
NEK3-205ENST00000610828 SNX15Q9NRS6 342 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 EMCNQ9ULC0 261 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 SOX13Q9UN79 622 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 SLC27A5Q9Y2P5 690 aa13.88□□□□□ -0.19
NEK3-205ENST00000610828 VGLL3A8MV65 326 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 AP3B1O00203 1094 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 PSMD3O43242 534 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 CACNG3O60359 315 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 TBX18O95935 607 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 GMPRP36959 345 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 ABCG1P45844 678 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 PAPOLAP51003 745 aaKnown RBP13.87□□□□□ -0.19
NEK3-205ENST00000610828 OCRLQ01968 901 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 STXBP5Q5T5C0 1151 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 FSTL4Q6MZW2 842 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 TFAP2DQ7Z6R9 452 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 SUGP1Q8IWZ8 645 aaKnown RBP13.87□□□□□ -0.19
NEK3-205ENST00000610828 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
NEK3-205ENST00000610828 ARHGAP18Q8N392 663 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 RAB3IL1Q8TBN0 382 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 FBXO32Q969P5 355 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 FCRL5Q96RD9 977 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 IL12RB2Q99665 862 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 TBL1YQ9BQ87 522 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 C20orf27Q9GZN8 174 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 GLOD4Q9HC38 313 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 RBM22Q9NW64 420 aaKnown RBP eCLIP13.87□□□□□ -0.19
NEK3-205ENST00000610828 MARCOQ9UEW3 520 aaPredicted RBP13.87□□□□□ -0.19
NEK3-205ENST00000610828 PLIN3O60664 434 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 ANXA9O76027 345 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 ALDH2P05091 517 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 HLA-DQB2P05538 268 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 SLC2A3P11169 496 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 COL6A1P12109 1028 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 KCNA4P22459 653 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 YWHAQP27348 245 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 PBX3P40426 434 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 LIMK2P53671 638 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 RPL10AP62906 217 aaKnown RBP13.87□□□□□ -0.19
NEK3-205ENST00000610828 STX3Q13277 289 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 PSMD5Q16401 504 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 MGAT5BQ3V5L5 792 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 TIGD7Q6NT04 549 aaPredicted RBP13.87□□□□□ -0.19
NEK3-205ENST00000610828 MSANTD2Q6P1R3 559 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 MIB1Q86YT6 1006 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 CRLF3Q8IUI8 442 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 C1orf74Q96LT6 269 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 CASD1Q96PB1 797 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 SEPT5Q99719 369 aaPredicted RBP13.87□□□□□ -0.19
NEK3-205ENST00000610828 LRMDAQ9H2I8 198 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 CD248Q9HCU0 757 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 IARS2Q9NSE4 1012 aaKnown RBP13.87□□□□□ -0.19
NEK3-205ENST00000610828 LRFN2Q9ULH4 789 aa13.87□□□□□ -0.19
NEK3-205ENST00000610828 NT5C1B-RDH14C9J2C7 533 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 HAUS5O94927 633 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 GSRP00390 522 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 MAGEA11P43364 429 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 MPP3Q13368 585 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 MRPL58Q14197 206 aaKnown RBP13.86□□□□□ -0.19
NEK3-205ENST00000610828 FRG1Q14331 258 aaKnown RBP13.86□□□□□ -0.19
NEK3-205ENST00000610828 POU6F1Q14863 301 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 SPDYAQ5MJ70 313 aa13.86□□□□□ -0.19
NEK3-205ENST00000610828 KDELC2Q7Z4H8 507 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms