RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 TBC1D31Q96DN5 1066 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 TRIM11Q96F44 468 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 TOE1Q96GM8 510 aaKnown RBP13.07□□□□□ -0.32
CD9-212ENST00000610354 BTBD6Q96KE9 485 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 SNRNP25Q9BV90 132 aaKnown RBP13.07□□□□□ -0.32
CD9-212ENST00000610354 ACE2Q9BYF1 805 aaPredicted RBP13.07□□□□□ -0.32
CD9-212ENST00000610354 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 SERGEFQ9UGK8 458 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 PCSK1NQ9UHG2 260 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 USP18Q9UMW8 372 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 PCDHGA5Q9Y5G8 931 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 ADAMTS9Q9P2N4 1935 aa13.07□□□□□ -0.32
CD9-212ENST00000610354 PATE3B3GLJ2 98 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 RNF103O00237 685 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 GDF9O60383 454 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 ZNF821O75541 412 aaPredicted RBP13.06□□□□□ -0.32
CD9-212ENST00000610354 ZNF806P0C7X5 589 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 ITPKAP23677 461 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 IL1R2P27930 398 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 ZNF75DP51815 510 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 METAP1P53582 386 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 ARF5P84085 180 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 RPL6Q02878 288 aaKnown RBP13.06□□□□□ -0.32
CD9-212ENST00000610354 GNA12Q03113 381 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 DLG2Q15700 870 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 EFHC2Q5JST6 749 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 C6orf118Q5T5N4 469 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 LINGO4Q6UY18 593 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 SLC36A4Q6YBV0 504 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 PRR23CQ6ZRP0 262 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 FAM124AQ86V42 546 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 VPS36Q86VN1 386 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 DCAF4L2Q8NA75 395 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 ZNF419Q96HQ0 510 aaPredicted RBP13.06□□□□□ -0.32
CD9-212ENST00000610354 KCTD15Q96SI1 283 aaPredicted RBP13.06□□□□□ -0.32
CD9-212ENST00000610354 SPON2Q9BUD6 331 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 KLC2Q9H0B6 622 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 FBRSQ9HAH7 460 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 DNAI1Q9UI46 699 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 HS3ST2Q9Y278 367 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 DOCK9Q9BZ29 2069 aa13.06□□□□□ -0.32
CD9-212ENST00000610354 SSU72P8A0A1W2PR75 194 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 WASH4PA8MWX3 477 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 MID1O15344 667 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 CREB3O43889 395 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 ACSL1P33121 698 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 MAPKAPK2P49137 400 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 AIF1P55008 147 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 ZNF33AQ06730 810 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 CST6Q15828 149 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 SLC18A3Q16572 532 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 SPDYCQ5MJ68 293 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 ERMARDQ5T6L9 678 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 PEAR1Q5VY43 1037 aaPredicted RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 ZNF776Q68DI1 518 aaPredicted RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 TXNRD3NBQ6F5E7 133 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 ZNF783Q6ZMS7 281 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 Q6ZVU0 165 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 CYP2U1Q7Z449 544 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 MMAAQ8IVH4 418 aaKnown RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 TC2NQ8N9U0 490 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 PIGKQ92643 395 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 ARHGEF2Q92974 986 aaKnown RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 PPP1R9BQ96SB3 815 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 C2orf49Q9BVC5 232 aaPredicted RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 NUP85Q9BW27 656 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 GPR174Q9BXC1 333 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 PABPC3Q9H361 631 aaKnown RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 RETREG1Q9H6L5 497 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 MRPL47Q9HD33 250 aaKnown RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 SLC25A13Q9UJS0 675 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 PILRBQ9UKJ0 227 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 SARDHQ9UL12 918 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 AP4E1Q9UPM8 1137 aa13.05□□□□□ -0.32
CD9-212ENST00000610354 ATXN2Q99700 1313 aaKnown RBP13.05□□□□□ -0.32
CD9-212ENST00000610354 LAMA1P25391 3075 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 C10orf142B7Z368 130 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 AKR1B15C9JRZ8 316 aaPredicted RBP13.04□□□□□ -0.32
CD9-212ENST00000610354 CBX4O00257 560 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 ACADMP11310 421 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 EPHB2P29323 1055 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 KRT83P78385 493 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 ACCSLQ4AC99 568 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 LCE2DQ5TA82 110 aaPredicted RBP13.04□□□□□ -0.32
CD9-212ENST00000610354 LYSMD4Q5XG99 296 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 AADATQ8N5Z0 425 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 RTL3Q8N8U3 475 aaKnown RBP13.04□□□□□ -0.32
CD9-212ENST00000610354 VOPP1Q96AW1 172 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 RMDN1Q96DB5 314 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 DHX35Q9H5Z1 703 aaKnown RBP13.04□□□□□ -0.32
CD9-212ENST00000610354 NHEJ1Q9H9Q4 299 aaPredicted RBP13.04□□□□□ -0.32
CD9-212ENST00000610354 ATP13A1Q9HD20 1204 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 VPS45Q9NRW7 570 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 SPTLC3Q9NUV7 552 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms