RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 THAP9Q9H5L6 903 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 THSD1Q9NS62 852 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 PPM1HQ9ULR3 514 aa16.26■□□□□ 0.19
HDDC2-210ENST00000609574 BPTFQ12830 3046 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 ASH1LQ9NR48 2969 aaKnown RBP16.25■□□□□ 0.19
HDDC2-210ENST00000609574 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 PSMA7O14818 248 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 PMM2O15305 246 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 P4HA2O15460 535 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 ATP9BO43861 1147 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 OPA1O60313 960 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 USP12O75317 370 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 CKMT1AP12532 417 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 RBMS1P29558 406 aaKnown RBP16.25■□□□□ 0.19
HDDC2-210ENST00000609574 LSSP48449 732 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 NUMBP49757 651 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 ERVPABLB-1P60509 514 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 KRT83P78385 493 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 COBLL1Q53SF7 1204 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 ARHGAP40Q5TG30 622 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 RRAGAQ7L523 313 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 DCP2Q8IU60 420 aaKnown RBP16.25■□□□□ 0.19
HDDC2-210ENST00000609574 SLC25A45Q8N413 288 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 CALN1Q9BXU9 219 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 POLR1BQ9H9Y6 1135 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 NCKIPSDQ9NZQ3 722 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 XPO7Q9UIA9 1087 aaKnown RBP16.25■□□□□ 0.19
HDDC2-210ENST00000609574 VPS28Q9UK41 221 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 SARDHQ9UL12 918 aa16.25■□□□□ 0.19
HDDC2-210ENST00000609574 MUC22E2RYF6 1773 aaPredicted RBP16.25■□□□□ 0.19
HDDC2-210ENST00000609574 PTPRQQ9UMZ3 2332 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 SYNJ2BP-COX16A0A087WUM0 186 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 A0A1W2PQU0 124 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 KPNA3O00505 521 aaPredicted RBP16.24■□□□□ 0.19
HDDC2-210ENST00000609574 KLK10O43240 276 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 PCDH8O95206 1070 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 MPOP05164 745 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 GP1BAP07359 652 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 GPD2P43304 727 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 SNX16P57768 344 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 HNRNPKP61978 463 aaKnown RBP eCLIP16.24■□□□□ 0.19
HDDC2-210ENST00000609574 GCNT1Q02742 428 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 PNOCQ13519 176 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 AGBL4Q5VU57 503 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 MAPK15Q8TD08 544 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 SMARCE1Q969G3 411 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 FAM131CQ96AQ9 280 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 CCDC97Q96F63 343 aaPredicted RBP16.24■□□□□ 0.19
HDDC2-210ENST00000609574 IFT43Q96FT9 208 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 CEP63Q96MT8 703 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 MYOCQ99972 504 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 ZSWIM1Q9BR11 485 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 FEM1AQ9BSK4 669 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 MUC3BQ9H195 1237 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 OSBPL2Q9H1P3 480 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 DDIT4Q9NX09 232 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 NLGN3Q9NZ94 848 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 COX16Q9P0S2 106 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 IPO11Q9UI26 975 aaKnown RBP16.24■□□□□ 0.19
HDDC2-210ENST00000609574 PCDHB1Q9Y5F3 818 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 ZNF462Q96JM2 2506 aa16.24■□□□□ 0.19
HDDC2-210ENST00000609574 H3BM21 787 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
HDDC2-210ENST00000609574 CSO75390 466 aaKnown RBP16.23■□□□□ 0.19
HDDC2-210ENST00000609574 CLDN11O75508 207 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 HNRNPA2B1P22626 353 aaKnown RBP16.23■□□□□ 0.19
HDDC2-210ENST00000609574 PPP1R2P41236 205 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 RECQLP46063 649 aaPredicted RBP16.23■□□□□ 0.19
HDDC2-210ENST00000609574 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
HDDC2-210ENST00000609574 Q6ZVU0 165 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 HORMAD1Q86X24 394 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 CIR1Q86X95 450 aaPredicted RBP16.23■□□□□ 0.19
HDDC2-210ENST00000609574 ATP11CQ8NB49 1132 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 KLK6Q92876 244 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 GRAMD1AQ96CP6 724 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 PPP1R16AQ96I34 528 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 SLC4A5Q9BY07 1137 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 GOLPH3LQ9H4A5 285 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 CA5BQ9Y2D0 317 aa16.23■□□□□ 0.19
HDDC2-210ENST00000609574 PLXNA2O75051 1894 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 THAP12O43422 761 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 PIAS2O75928 621 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 DXOO77932 396 aaKnown RBP16.22■□□□□ 0.19
HDDC2-210ENST00000609574 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
HDDC2-210ENST00000609574 CALCAP01258 141 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 PRNPP04156 253 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 GLI1P08151 1106 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 PRLRP16471 622 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 CHRNA3P32297 505 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 METAP1P53582 386 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 MEA1Q16626 185 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 EFHC1Q5JVL4 640 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 FBXL22Q6P050 247 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 DENND1BQ6P3S1 775 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 TMEM110Q86TL2 294 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 SH2D3CQ8N5H7 860 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 TMIEQ8NEW7 156 aa16.22■□□□□ 0.19
HDDC2-210ENST00000609574 TPCN2Q8NHX9 752 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms