RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ACADSBP45954 432 aa17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 MCCD1P59942 119 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 DLG2Q15700 870 aa17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 AGBL4Q5VU57 503 aa17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 NEK5Q6P3R8 708 aa17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 DNAJC28Q9NX36 388 aa17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 NCKIPSDQ9NZQ3 722 aa17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 XPO7Q9UIA9 1087 aaKnown RBP17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 PPM1HQ9ULR3 514 aa17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 HEMK1Q9Y5R4 338 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-211ENST00000609024 ARID1BQ8NFD5 2236 aaPredicted RBP17.83■□□□□ 0.45
CHMP4A-211ENST00000609024 MAST4O15021 2626 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 KCNU1A8MYU2 1149 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 KPNA3O00505 521 aaPredicted RBP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 ARHGAP6O43182 974 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 GABBR2O75899 941 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 PCDH8O95206 1070 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 HNRNPA2B1P22626 353 aaKnown RBP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 NDUFA8P51970 172 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 PLK1P53350 603 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 HNRNPKP61978 463 aaKnown RBP eCLIP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 FKBP3Q00688 224 aaKnown RBP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 ZNF177Q13360 481 aaPredicted RBP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 Q6ZVU0 165 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 CIR1Q86X95 450 aaPredicted RBP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 SMYD4Q8IYR2 804 aaPredicted RBP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 FAM174AQ8TBP5 190 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 IFI44Q8TCB0 444 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 FRS2Q8WU20 508 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 FAM131CQ96AQ9 280 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 GRAMD1AQ96CP6 724 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 RPRD1AQ96P16 312 aaPredicted RBP17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 FAM204AQ9H8W3 233 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 POPDC2Q9HBU9 364 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 RMND1Q9NWS8 449 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 VPS28Q9UK41 221 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 SATB2Q9UPW6 733 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 HPSEQ9Y251 543 aa17.83■□□□□ 0.44
CHMP4A-211ENST00000609024 MGAQ8IWI9 3026 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 H3BM21 787 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 PYCARD-AS1I3L0S3 204 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 ATP9BO43861 1147 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 TRUB2O95900 331 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 FYNP06241 537 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 SYPL2Q5VXT5 272 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 FOXR1Q6PIV2 292 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 CCDC81Q6ZN84 652 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 KRBA2Q6ZNG9 492 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 BEND5Q7L4P6 421 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 PRICKLE2Q7Z3G6 844 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 PTAR1Q7Z6K3 402 aaPredicted RBP17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 HORMAD1Q86X24 394 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 DCP2Q8IU60 420 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 UBR7Q8N806 425 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 TMEM145Q8NBT3 493 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 OR13H1Q8NG92 308 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 IFT43Q96FT9 208 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 MED15Q96RN5 788 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 FAM117AQ9C073 453 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 SEMA4CQ9C0C4 833 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 FZD3Q9NPG1 666 aa17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 IPO11Q9UI26 975 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-211ENST00000609024 COL6A6A6NMZ7 2263 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 SYNJ2BP-COX16A0A087WUM0 186 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 CPED1A4D0V7 1026 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 SCAMP1O15126 338 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 WISP1O95388 367 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 MYF5P13349 255 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 VASPP50552 380 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 YWHAZP63104 245 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 KRT83P78385 493 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 KRT85P78386 507 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 ISXQ2M1V0 245 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 ARL14Q8N4G2 192 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 TTC9Q92623 222 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 MUC3BQ9H195 1237 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 METTL14Q9HCE5 456 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 ASCL3Q9NQ33 180 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 COX16Q9P0S2 106 aa17.81■□□□□ 0.44
CHMP4A-211ENST00000609024 MYO18BQ8IUG5 2567 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 A6NNZ2 444 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 K7ESM1 405 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 RIOK3O14730 519 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 MED7O43513 233 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 CCR1P32246 355 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 RECQLP46063 649 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 CDK17Q00537 523 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 MTA1Q13330 715 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 ZSCAN23Q3MJ62 389 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 ZNF542PQ5EBM4 170 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 ZCCHC8Q6NZY4 707 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 Q6ZSR6 202 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 ATP11CQ8NB49 1132 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 TPCN2Q8NHX9 752 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 PPP1R16AQ96I34 528 aa17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 FEM1AQ9BSK4 669 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms