RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 MAFKO60675 156 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 RHOXF2BP0C7M4 288 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 HLA-FP30511 346 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 STIP1P31948 543 aaKnown RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 PTGIRP43119 386 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 TUBB4BP68371 445 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 ZNF33AQ06730 810 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 LMAN2Q12907 356 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 SERINC3Q13530 473 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 PUS10Q3MIT2 529 aaKnown RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 GLE1Q53GS7 698 aaKnown RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 IL31Q6EBC2 164 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 TIGD7Q6NT04 549 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 CPA6Q8N4T0 437 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 NAT16Q8N8M0 369 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 ZNF557Q8N988 423 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 UBXN4Q92575 508 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 FERMT1Q9BQL6 677 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 RHOXF2Q9BQY4 288 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 TRIM51Q9BSJ1 452 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 SPON2Q9BUD6 331 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 USP29Q9HBJ7 922 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 ATP13A1Q9HD20 1204 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 GTSE1Q9NYZ3 720 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 SEPT10Q9P0V9 454 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 KIAA1522Q9P206 1035 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 VPS28Q9UK41 221 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 FAM187AA6NFU0 413 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 KCNK1O00180 336 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 CBX4O00257 560 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 MTSS1O43312 755 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 CACNG3O60359 315 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 ZNF189O75820 626 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 HEXIM1O94992 359 aaKnown RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 IL9P15248 144 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 CCNCP24863 283 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 MZF1P28698 734 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 CD70P32970 193 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 NRLP54845 237 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 OXCT1P55809 520 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 NR1H3Q13133 447 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 RUNX3Q13761 415 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 TRIP13Q15645 432 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 AAK1Q2M2I8 961 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 SYDE1Q6ZW31 735 aaPredicted RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 PRUNE1Q86TP1 453 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 GLIS1Q8NBF1 620 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 TTC8Q8TAM2 541 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 RTP4Q96DX8 246 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 TSGA13Q96PP4 275 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 XPO6Q96QU8 1125 aaKnown RBP11.38□□□□□ -0.59
CTCFL-214ENST00000608108 FEM1AQ9BSK4 669 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 BRD9Q9H8M2 597 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 KCNK12Q9HB15 430 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 ABCB8Q9NUT2 735 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 HPCAL4Q9UM19 191 aa11.38□□□□□ -0.59
CTCFL-214ENST00000608108 J3KR12 359 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 RNF103O00237 685 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 ARNTLO00327 626 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 PRAMEF11O60813 436 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 STK10O94804 968 aaKnown RBP11.37□□□□□ -0.59
CTCFL-214ENST00000608108 KRT14P02533 472 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 ETS1P14921 441 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 GLDCP23378 1020 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 ACTN2P35609 894 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 SLC7A5Q01650 507 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 IL10RBQ08334 325 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 ZBTB17Q13105 803 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 SLC12A1Q13621 1099 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 PTK6Q13882 451 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 ERCC6LQ2NKX8 1250 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 P3H1Q32P28 736 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 PLEKHG6Q3KR16 790 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 FAM182AQ5T1J6 154 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 MAMSTRQ6ZN01 415 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 C12orf40Q86WS4 652 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 APCDD1Q8J025 514 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 DCAF4L2Q8NA75 395 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 NSMCE1Q8WV22 266 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 LMLNQ96KR4 655 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 C2orf49Q9BVC5 232 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-214ENST00000608108 ACE2Q9BYF1 805 aaPredicted RBP11.37□□□□□ -0.59
CTCFL-214ENST00000608108 CEP41Q9BYV8 373 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 SLC2A11Q9BYW1 496 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 PCDH9Q9HC56 1237 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 DNAJC17Q9NVM6 304 aaKnown RBP11.37□□□□□ -0.59
CTCFL-214ENST00000608108 LIMD1Q9UGP4 676 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 ASIC3Q9UHC3 531 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 GGA2Q9UJY4 613 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 UTP11Q9Y3A2 253 aaKnown RBP11.37□□□□□ -0.59
CTCFL-214ENST00000608108 NEU2Q9Y3R4 380 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 OR51B4Q9Y5P0 310 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 TRIOO75962 3097 aa11.37□□□□□ -0.59
CTCFL-214ENST00000608108 MATN3O15232 486 aa11.36□□□□□ -0.59
CTCFL-214ENST00000608108 KDELR3O43731 214 aa11.36□□□□□ -0.59
CTCFL-214ENST00000608108 SNAP91O60641 907 aa11.36□□□□□ -0.59
CTCFL-214ENST00000608108 TULP3O75386 442 aa11.36□□□□□ -0.59
CTCFL-214ENST00000608108 ZSCAN5DPP0CG00 497 aa11.36□□□□□ -0.59
CTCFL-214ENST00000608108 PABPC1P11940 636 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms