RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ALOX15BO15296 676 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 SLC7A4O43246 635 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 PLRG1O43660 514 aaKnown RBP7.82□□□□□ -1.16
CUX1-219ENST00000606749 SNAP91O60641 907 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 MT-CO1P00395 513 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 UCHL3P15374 230 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 ZNF18P17022 549 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 SULT1E1P49888 294 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 PPP2CBP62714 309 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 PPP2CAP67775 309 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 KRT83P78385 493 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 DEUP1Q05D60 604 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 CNTN1Q12860 1018 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 POM121L1PQ3SYA9 428 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 C2CD6Q53TS8 623 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 TCP11X2Q5H9J9 407 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 CT47A1Q5JQC4 288 aaPredicted RBP7.82□□□□□ -1.16
CUX1-219ENST00000606749 TAF3Q5VWG9 929 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 FAM46CQ5VWP2 391 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 Q6ZVU0 165 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 SETD3Q86TU7 594 aaPredicted RBP7.82□□□□□ -1.16
CUX1-219ENST00000606749 NOP9Q86U38 636 aaKnown RBP7.82□□□□□ -1.16
CUX1-219ENST00000606749 PRPF39Q86UA1 669 aaKnown RBP7.82□□□□□ -1.16
CUX1-219ENST00000606749 PROSER1Q86XN7 944 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 XYLT1Q86Y38 959 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 GATAD2AQ86YP4 633 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 SH2D3CQ8N5H7 860 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 MFSD2AQ8NA29 543 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 ATP11CQ8NB49 1132 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 PIP4K2CQ8TBX8 421 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 SAP25Q8TEE9 199 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 CPA5Q8WXQ8 436 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 TMEM131Q92545 1883 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 TBCBQ99426 244 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 STK33Q9BYT3 514 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 MUC3BQ9H195 1237 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 PDCL3Q9H2J4 239 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 ERVMER34-1Q9H9K5 563 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 TMPRSS4Q9NRS4 437 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 TMEM51Q9NW97 253 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 DACH1Q9UI36 760 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 TMEM59LQ9UK28 342 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 STAP1Q9ULZ2 295 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 HS3ST2Q9Y278 367 aa7.82□□□□□ -1.16
CUX1-219ENST00000606749 PTPRBP23467 1997 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 IGLV3-10A0A075B6K4 115 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 FAM170AA1A519 330 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 C1QTNF3-AMACRE9PGA6 284 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 K7ERQ8 282 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 PES1O00541 588 aaKnown RBP7.81□□□□□ -1.16
CUX1-219ENST00000606749 BNIP3LO60238 219 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 SRGAP2O75044 1071 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 LDOC1O95751 146 aaPredicted RBP7.81□□□□□ -1.16
CUX1-219ENST00000606749 ITGAVP06756 1048 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 CTSLP07711 333 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 RHOCP08134 193 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 MMEP08473 750 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 SRCP12931 536 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 OR1E1P30953 314 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 MAT2AP31153 395 aaKnown RBP7.81□□□□□ -1.16
CUX1-219ENST00000606749 NUDT1P36639 197 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 FLT3P36888 993 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 RXRGP48443 463 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 NXPH1P58417 271 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 TAS2R38P59533 333 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 BNIP3Q12983 259 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 INAVAQ3KP66 663 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 SLC45A4Q5BKX6 768 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 ACBD5Q5T8D3 534 aaPredicted RBP7.81□□□□□ -1.16
CUX1-219ENST00000606749 FAM102AQ5T9C2 384 aaPredicted RBP7.81□□□□□ -1.16
CUX1-219ENST00000606749 AGBL4Q5VU57 503 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 NAPEPLDQ6IQ20 393 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 TRNP1Q6NT89 227 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 LRRC31Q6UY01 552 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 LINGO4Q6UY18 593 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 ARCQ7LC44 396 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 BNIPLQ7Z465 357 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 TRIM69Q86WT6 500 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 SPATS2Q86XZ4 545 aaKnown RBP7.81□□□□□ -1.16
CUX1-219ENST00000606749 MARCH9Q86YJ5 346 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 GALNT15Q8N3T1 639 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 TMIEQ8NEW7 156 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 OR2A12Q8NGT7 310 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 HAPLN3Q96S86 360 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 NUP62CLQ9H1M0 184 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 CCDC86Q9H6F5 360 aaKnown RBP7.81□□□□□ -1.16
CUX1-219ENST00000606749 GDF3Q9NR23 364 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 MPP6Q9NZW5 540 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 FTSJ1Q9UET6 329 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 VPS51Q9UID3 782 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 DMTF1Q9Y222 760 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 FARP1Q9Y4F1 1045 aaPredicted RBP7.81□□□□□ -1.16
CUX1-219ENST00000606749 PAXBP1Q9Y5B6 917 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 PLXNA2O75051 1894 aa7.81□□□□□ -1.16
CUX1-219ENST00000606749 CEP295Q9C0D2 2601 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 ILVBLA1L0T0 632 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 FAM149AA5PLN7 773 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 TRABD2BA6NFA1 517 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 E9PAM4 449 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 F8VZ95 297 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms