RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CUL4AQ13619 759 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 KRT39Q6A163 491 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZCCHC8Q6NZY4 707 aaKnown RBP12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 GCNT7Q6ZNI0 430 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 USP53Q70EK8 1073 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CIR1Q86X95 450 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 LGI2Q8N0V4 545 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 WDR36Q8NI36 951 aaKnown RBP12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 DQX1Q8TE96 717 aaKnown RBP12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CLEC4CQ8WTT0 213 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 IRGQQ8WZA9 623 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 EXTL1Q92935 676 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FAXDC2Q96IV6 333 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZSCAN16Q9H4T2 348 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 XPO7Q9UIA9 1087 aaKnown RBP12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PPM1HQ9ULR3 514 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TRAF3IP3Q9Y228 551 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ARID1BQ8NFD5 2236 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 O00370 1275 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 BNIP3LO60238 219 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 GJB6O95452 261 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ITGA2BP08514 1039 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZNF18P17022 549 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 HNRNPA2B1P22626 353 aaKnown RBP12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 HNRNPKP61978 463 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 DRAP1Q14919 205 aaPredicted RBP12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZNF284Q2VY69 593 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ACCSLQ4AC99 568 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PIP5KL1Q5T9C9 394 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 RAP1GAP2Q684P5 730 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 OR6B2Q6IFH4 312 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 Q6ZSR6 202 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 Q6ZVU0 165 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PTAR1Q7Z6K3 402 aaPredicted RBP12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 HORMAD1Q86X24 394 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CHSY1Q86X52 802 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 IFT43Q96FT9 208 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 EEF2KMTQ96G04 330 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SERPINB11Q96P15 392 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SYNDIG1Q9H7V2 258 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 RAB20Q9NX57 234 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NCKIPSDQ9NZQ3 722 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TLR6Q9Y2C9 796 aa12.11□□□□□ -0.47
PDLIM1P1-201ENST00000604187 RIOK3O14730 519 aaKnown RBP12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MUSKO15146 869 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CASC3O15234 703 aaKnown RBP12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TCEA3O75764 348 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ITGB2P05107 769 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ITGB6P18564 788 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TACR2P21452 398 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 GTF2H1P32780 548 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PDX1P52945 283 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NUCB2P80303 420 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SULT2A1Q06520 285 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ENPEPQ07075 957 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 DEFB133Q30KQ1 61 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SEL1L3Q68CR1 1132 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PMF1Q6P1K2 205 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 XKR5Q6UX68 686 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ABI3BPQ7Z7G0 1075 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TAC4Q86UU9 113 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CEP57L1Q8IYX8 460 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SGF29Q96ES7 293 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SLC39A13Q96H72 371 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
PDLIM1P1-201ENST00000604187 UTP20O75691 2785 aaKnown RBP12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CCDC187A0A096LP49 1063 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 A6NNZ2 444 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 KPNA3O00505 521 aaPredicted RBP12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MCF2LO15068 1137 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ALOX15BO15296 676 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ATP9BO43861 1147 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 YEATS4O95619 227 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 APOEP02649 317 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 AFPP02771 609 aaKnown RBP12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CSF2P04141 144 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FYNP06241 537 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 VDRP11473 427 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NME1P15531 152 aaKnown RBP12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PSMC2P35998 433 aaKnown RBP12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TLE1Q04724 770 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NNTQ13423 1086 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CUL2Q13617 745 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SLC12A1Q13621 1099 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FZD2Q14332 565 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NR0B2Q15466 257 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TGIF1Q15583 401 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 DLG2Q15700 870 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PERM1Q5SV97 790 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NEK5Q6P3R8 708 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PARGQ86W56 976 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CCAR2Q8N163 923 aaKnown RBP12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TPCN2Q8NHX9 752 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ERCC4Q92889 916 aaPredicted RBP12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PAGE5Q96GU1 130 aa12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZNF396Q96N95 335 aaPredicted RBP12.09□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MIS12Q9H081 205 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms