RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	CLEC4C	Q8WTT0	213 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	HTR3C	Q8WXA8	447 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	SLC39A13	Q96H72	371 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	BMF	Q96LC9	184 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	PSMG3-AS1	Q96PY0	264 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	DNAJC28	Q9NX36	388 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	ACSL6	Q9UKU0	697 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	CEP83	Q9Y592	693 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	PCDHGA7	Q9Y5G6	932 aa		11.37	□□□□□ -0.59
NUP62-222	ENST00000600935	CCDC187	A0A096LP49	1063 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	MAPK13	O15264	365 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	ATP9B	O43861	1147 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	MOCS3	O95396	460 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	GJB6	O95452	261 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	CSF2	P04141	144 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	CTSL	P07711	333 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	LCP1	P13796	627 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	NME1	P15531	152 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	HNRNPA2B1	P22626	353 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	VASP	P50552	380 aa	Predicted RBP	11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	MCCD1	P59942	119 aa	Predicted RBP	11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.36	□□□□□ -0.59	3e-6	■■■■□ 20.5
NUP62-222	ENST00000600935	CLCA4	Q14CN2	919 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	TBR1	Q16650	682 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	C8orf34	Q49A92	452 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	KMT5B	Q4FZB7	885 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	TMEM259	Q4ZIN3	620 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	TPRG1L	Q5T0D9	272 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	FAM46C	Q5VWP2	391 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	OR6B2	Q6IFH4	312 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935		Q6ZSR6	202 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	B3GNT8	Q7Z7M8	397 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	HORMAD1	Q86X24	394 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	SIX6OS1	Q8N1H7	587 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	OR8D1	Q8WZ84	308 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	ALG14	Q96F25	216 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	EEF2KMT	Q96G04	330 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	FAXDC2	Q96IV6	333 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	ARHGAP9	Q9BRR9	750 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	EPN3	Q9H201	632 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	MAGEF1	Q9HAY2	307 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	MAN2B2	Q9Y2E5	1009 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	CSNK1G3	Q9Y6M4	447 aa		11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	ZFC3H1	O60293	1989 aa	Known RBP	11.36	□□□□□ -0.59
NUP62-222	ENST00000600935	TYW5	A2RUC4	315 aa	Known RBP	11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	POM121B	A6NF01	834 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935		O00370	1275 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	PIK3R2	O00459	728 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	NTN3	O00634	580 aa	Predicted RBP	11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	MCF2L	O15068	1137 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	ALOX15B	O15296	676 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	POLR2D	O15514	142 aa	Known RBP	11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	LTF	P02788	710 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	PDGFRA	P16234	1089 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	SYT1	P21579	422 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	AKT2	P31751	481 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	PLK1	P53350	603 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	CUL4A	Q13619	759 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	FGL2	Q14314	439 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	DEFB133	Q30KQ1	61 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	SEL1L3	Q68CR1	1132 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	CXorf57	Q6NSI4	855 aa	Known RBP	11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	PMF1	Q6P1K2	205 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	NEK5	Q6P3R8	708 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935		Q6ZVU0	165 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	DSG4	Q86SJ6	1040 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	CIR1	Q86X95	450 aa	Predicted RBP	11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	SLC35F3	Q8IY50	421 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	LGI2	Q8N0V4	545 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	TTC39C	Q8N584	583 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	OR52K2	Q8NGK3	314 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	TPCN2	Q8NHX9	752 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	DQX1	Q8TE96	717 aa	Known RBP	11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	LIN37	Q96GY3	246 aa	Predicted RBP	11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	DDX50	Q9BQ39	737 aa	Known RBP	11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	FUCA2	Q9BTY2	467 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	BOC	Q9BWV1	1114 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	DNAI2	Q9GZS0	605 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	SLC25A18	Q9H1K4	315 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	MMRN2	Q9H8L6	949 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	TMEM8A	Q9HCN3	771 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	EVA1B	Q9NVM1	165 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	SALL4	Q9UJQ4	1053 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	TLR6	Q9Y2C9	796 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	FRMD4B	Q9Y2L6	1034 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	PCDHGA4	Q9Y5G9	962 aa		11.35	□□□□□ -0.59
NUP62-222	ENST00000600935	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935		A6NNZ2	444 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	C1QTNF3-AMACR	E9PGA6	284 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	PLD2	O14939	933 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	MUSK	O15146	869 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	SPTLC2	O15270	562 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	RAD51B	O15315	384 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	SPINT1	O43278	529 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	AQP9	O43315	295 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	PPFIA2	O75334	1257 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	MOCS2	O96007	188 aa	Predicted RBP	11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	SETSIP	P0DME0	302 aa		11.34	□□□□□ -0.59
NUP62-222	ENST00000600935	SFTPC	P11686	197 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms