RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FCGRTP55899 365 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 ANKRD20A4Q4UJ75 823 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TEX44Q53QW1 395 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 INTS6LQ5JSJ4 861 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 FSTL4Q6MZW2 842 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 GLB1LQ6UWU2 654 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 C4orf22Q6V702 233 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 SH2D5Q6ZV89 423 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 EXT2Q93063 718 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 RTP3Q9BQQ7 232 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 MLPHQ9BV36 600 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 FTHL17Q9BXU8 183 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 WWP1Q9H0M0 922 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 PNPLA8Q9NP80 782 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 MOCS1Q9NZB8 636 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZNF180Q9UJW8 692 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 SHROOM3Q8TF72 1996 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TXNDC9O14530 226 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TADA2AO75478 443 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 KRT36O76013 467 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 CPB1P15086 417 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 SPRP35270 261 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 THOC5Q13769 683 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 LPIN1Q14693 890 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 RCN1Q15293 331 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 XKR4Q5GH76 650 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 ITPRIPL1Q6GPH6 555 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZNF280DQ6N043 979 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 LDB1Q86U70 411 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 CHSY1Q86X52 802 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 ABI1Q8IZP0 508 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TEX9Q8N6V9 391 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 KCTD13Q8WZ19 329 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TTC1Q99614 292 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 NMUR1Q9HB89 426 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 DNAJB4Q9UDY4 337 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 HBS1LQ9Y450 684 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 CCDC160A6NGH7 325 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 TK2O00142 265 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 B4GALT3O60512 393 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 GLRA3O75311 464 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 AP2A1O95782 977 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 PIRTP0C851 137 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 DHRS4L1P0CG22 281 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 CPA3P15088 417 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 CRHR1P34998 444 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 GLUD2P49448 558 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 MPP1Q00013 466 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 KHDC1Q4VXA5 237 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 RSPH1Q8WYR4 309 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 NT5MQ9NPB1 228 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 TAS2R1Q9NYW7 299 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC2A6Q9UGQ3 507 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 APOBEC2Q9Y235 224 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 GIT1Q9Y2X7 761 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 PLIN3O60664 434 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 UBTFL6P0CB48 400 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZCCHC18P0CG32 403 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 MAGEA3P43357 314 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 GATMP50440 423 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC25A3Q00325 362 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 CCDC15Q0P6D6 951 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 CNGA3Q16281 694 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 MGAT5BQ3V5L5 792 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 SERINC5Q86VE9 423 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC41A1Q8IVJ1 513 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 RYBPQ8N488 228 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 PPFIBP2Q8ND30 876 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 OR6P1Q8NGX9 317 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 MARK4Q96L34 752 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 NDNQ99608 321 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 DDX50Q9BQ39 737 aaKnown RBP11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 BTBD10Q9BSF8 475 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 NACA2Q9H009 215 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 CYP4F12Q9HCS2 524 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 CYLDQ9NQC7 956 aa11.75□□□□□ -0.53
ARHGEF1-220ENST00000600274 SPECC1L-ADORA2AF8WAN1 911 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 MT-CO1P00395 513 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 F9P00740 461 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 PLK1P53350 603 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 TUSC3Q13454 348 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 PAFAH1B3Q15102 231 aaKnown RBP11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 RASIP1Q5U651 963 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 ESRP1Q6NXG1 681 aaKnown RBP11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 PAF1Q8N7H5 531 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 CNTD1Q8N815 330 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC39A8Q9C0K1 460 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 FAM124BQ9H5Z6 455 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 CHST12Q9NRB3 414 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 PDE5AO76074 875 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 C2P06681 752 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 GRM3Q14832 879 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 PSMD5Q16401 504 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 KCTD4Q8WVF5 259 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 WDR60Q8WVS4 1066 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 BHMTQ93088 406 aa11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 RCOR3Q9P2K3 495 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF1-220ENST00000600274 EMCNQ9ULC0 261 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms