RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 OR8D1Q8WZ84 308 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 FEM1AQ9BSK4 669 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 MUC3BQ9H195 1237 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 WDCPQ9H6R7 721 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 PIGVQ9NUD9 493 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.25■□□□□ 0.67
PNKP-213ENST00000599543 PAXBP1Q9Y5B6 917 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 DOCK9Q9BZ29 2069 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3DA0A087WVF3 549 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3IA0A087WXS9 549 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3EA0A087X179 549 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3KA0A087X1G2 549 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3FA6NER0 549 aaPredicted RBP19.24■□□□□ 0.67
PNKP-213ENST00000599543 LRRC10BA6NIK2 292 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 GOLGA8CPA6NN73 597 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3LB9A6J9 549 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 GOLGA6L19H0YKK7 550 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 SERPINC1P01008 464 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3HP0C7X1 549 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 CYP11B1P15538 503 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 VASPP50552 380 aaPredicted RBP19.24■□□□□ 0.67
PNKP-213ENST00000599543 CDH4P55283 916 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 BRMS1LQ5PSV4 323 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 OTUD1Q5VV17 481 aaPredicted RBP19.24■□□□□ 0.67
PNKP-213ENST00000599543 FAM46CQ5VWP2 391 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3GQ6DHY5 549 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3CQ6IPX1 549 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.24■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D3Q8IZP1 549 aaPredicted RBP19.24■□□□□ 0.67
PNKP-213ENST00000599543 OR52K2Q8NGK3 314 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 ALG14Q96F25 216 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 NPY6RQ99463 290 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 NAA15Q9BXJ9 866 aaKnown RBP19.24■□□□□ 0.67
PNKP-213ENST00000599543 TKTL2Q9H0I9 626 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 EBF2Q9HAK2 575 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 RTN4Q9NQC3 1192 aaKnown RBP19.24■□□□□ 0.67
PNKP-213ENST00000599543 TOR4AQ9NXH8 423 aa19.24■□□□□ 0.67
PNKP-213ENST00000599543 ATP9BO43861 1147 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 ATXN1LP0C7T5 689 aaKnown RBP19.23■□□□□ 0.67
PNKP-213ENST00000599543 CD38P28907 300 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 CDH5P33151 784 aaPredicted RBP19.23■□□□□ 0.67
PNKP-213ENST00000599543 DRD3P35462 400 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 FANCCQ00597 558 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 DLG2Q15700 870 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 SLC45A4Q5BKX6 768 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 FAM102AQ5T9C2 384 aaPredicted RBP19.23■□□□□ 0.67
PNKP-213ENST00000599543 CCNI2Q6ZMN8 369 aaPredicted RBP19.23■□□□□ 0.67
PNKP-213ENST00000599543 Q6ZVU0 165 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 C14orf80Q86SX3 495 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 ERICH1Q86X53 443 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 C18orf8Q96DM3 657 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 SERAC1Q96JX3 654 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 ARHGEF38Q9NXL2 777 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 TBC1D30Q9Y2I9 924 aa19.23■□□□□ 0.67
PNKP-213ENST00000599543 A0A1B0GTQ1 180 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 C1QTNF3-AMACRE9PGA6 284 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 ALOX15BO15296 676 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 SLC7A4O43246 635 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 TNFSF14O43557 240 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 BNIP3LO60238 219 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 ADCY5O95622 1261 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 LSM8O95777 96 aaKnown RBP19.22■□□□□ 0.67
PNKP-213ENST00000599543 F9P00740 461 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 WNT1P04628 370 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 TFE3P19532 575 aaPredicted RBP19.22■□□□□ 0.67
PNKP-213ENST00000599543 SCNN1AP37088 669 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 GABRB2P47870 512 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 CXCR3P49682 368 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 METAP1P53582 386 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 PPP2CBP62714 309 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 PPP2CAP67775 309 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 TPM4P67936 248 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 KRT83P78385 493 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 DEUP1Q05D60 604 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 C5orf22Q49AR2 442 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 TAF3Q5VWG9 929 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 SH2D3CQ8N5H7 860 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 MSANTD4Q8NCY6 345 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 NEK11Q8NG66 645 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 PGAP3Q96FM1 320 aaPredicted RBP19.22■□□□□ 0.67
PNKP-213ENST00000599543 ELF4Q99607 663 aaPredicted RBP19.22■□□□□ 0.67
PNKP-213ENST00000599543 C2orf49Q9BVC5 232 aaPredicted RBP19.22■□□□□ 0.67
PNKP-213ENST00000599543 KDM4CQ9H3R0 1056 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 GDF3Q9NR23 364 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 TMEM51Q9NW97 253 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 FTSJ1Q9UET6 329 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 OR51B4Q9Y5P0 310 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 COL5A1P20908 1838 aaPredicted RBP19.22■□□□□ 0.67
PNKP-213ENST00000599543 APC2O95996 2303 aa19.22■□□□□ 0.67
PNKP-213ENST00000599543 C10orf142B7Z368 130 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 F8VZ95 297 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 PLK4O00444 970 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 LATO43561 262 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 RTN2O75298 545 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 CNTN5O94779 1100 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 GFPT2O94808 682 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 RHOCP08134 193 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 SCAPQ12770 1279 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 SLC25A52Q3SY17 297 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 POM121L1PQ3SYA9 428 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms