RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 TTC17Q96AE7 1141 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 MRGPRX3Q96LB0 322 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 MRGPRX1Q96LB2 322 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 C1orf74Q96LT6 269 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 CCDC42Q96M95 316 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 HAPLN3Q96S86 360 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 CNPY3Q9BT09 278 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 MKRN2Q9H000 416 aaKnown RBP12.4□□□□□ -0.42
ZNF548-209ENST00000598895 THAP2Q9H0W7 228 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 MUC3BQ9H195 1237 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 DUSP15Q9H1R2 295 aaPredicted RBP12.4□□□□□ -0.42
ZNF548-209ENST00000598895 TMEM245Q9H330 911 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 PRDM16Q9HAZ2 1276 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 GPATCH2LQ9NWQ4 482 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 SLCO3A1Q9UIG8 710 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 VPS28Q9UK41 221 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 GMEB2Q9UKD1 530 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 ERVW-1Q9UQF0 538 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 JRKLQ9Y4A0 524 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 CACNA1HO95180 2353 aa12.4□□□□□ -0.43
ZNF548-209ENST00000598895 CKAP5Q14008 2032 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 DRGXA6NNA5 263 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 NPC1O15118 1278 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 CLDN11O75508 207 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 ASLP04424 464 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 TCP1P17987 556 aaKnown RBP12.39□□□□□ -0.43
ZNF548-209ENST00000598895 P2RY2P41231 377 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 COPAP53621 1224 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 ECT2LQ008S8 904 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 SPEM2Q0P670 501 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 MAP7D1Q3KQU3 841 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 PLK5Q496M5 336 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 C5orf22Q49AR2 442 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 DAB2IPQ5VWQ8 1189 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 SLFN11Q7Z7L1 901 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 TMPRSS6Q8IU80 811 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 TMEFF1Q8IYR6 380 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 KIAA2013Q8IYS2 634 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 MMGT1Q8N4V1 131 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 NOA1Q8NC60 698 aaKnown RBP12.39□□□□□ -0.43
ZNF548-209ENST00000598895 MYO19Q96H55 970 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 SPACA7Q96KW9 195 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 ZYG11BQ9C0D3 744 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 ISCUQ9H1K1 167 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 ARRDC1-AS1Q9H2J1 176 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 PRSS16Q9NQE7 514 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 OR12D3Q9UGF7 316 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 PCSK1NQ9UHG2 260 aa12.39□□□□□ -0.43
ZNF548-209ENST00000598895 MBD1Q9UIS9 605 aaPredicted RBP12.39□□□□□ -0.43
ZNF548-209ENST00000598895 THADAQ6YHU6 1953 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 A0A0D9SEW6 157 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 TMEM191CA6NGB0 347 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 A6NNZ2 444 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 CREB3O43889 395 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 SIN3BO75182 1162 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
ZNF548-209ENST00000598895 VAV1P15498 845 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 DESP17661 470 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 OR1E1P30953 314 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 TNNT3P45378 269 aaPredicted RBP12.38□□□□□ -0.43
ZNF548-209ENST00000598895 DHPSP49366 369 aaPredicted RBP12.38□□□□□ -0.43
ZNF548-209ENST00000598895 SLC12A1Q13621 1099 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 E2F5Q15329 346 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 TUBB8Q3ZCM7 444 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 ACCSLQ4AC99 568 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 EFHC2Q5JST6 749 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 ARTNQ5T4W7 220 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
ZNF548-209ENST00000598895 FAM124AQ86V42 546 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 OR7D4Q8NG98 312 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 PRCCQ92733 491 aaPredicted RBP12.38□□□□□ -0.43
ZNF548-209ENST00000598895 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 ALG14Q96F25 216 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 TRIM11Q96F44 468 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 BTBD6Q96KE9 485 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 FEM1AQ9BSK4 669 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 SPON2Q9BUD6 331 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 DEF6Q9H4E7 631 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 SMOC1Q9H4F8 434 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 RNF14Q9UBS8 474 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 FZD10Q9ULW2 581 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 TBC1D30Q9Y2I9 924 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 HYOU1Q9Y4L1 999 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 SCINQ9Y6U3 715 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 DOCK4Q8N1I0 1966 aa12.38□□□□□ -0.43
ZNF548-209ENST00000598895 CEP192Q8TEP8 1941 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 IGLV3-10A0A075B6K4 115 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 IGHV1OR15-9A0A0B4J2B8 117 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 BNIP3LO60238 219 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 SNAP91O60641 907 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 RHOBTB1O94844 696 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 LRIG2O94898 1065 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 LCA5LO95447 670 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 RETP07949 1114 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 SRPRAP08240 638 aaKnown RBP12.37□□□□□ -0.43
ZNF548-209ENST00000598895 MYBL1P10243 752 aa12.37□□□□□ -0.43
ZNF548-209ENST00000598895 ACADMP11310 421 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms