RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 KCNJ12Q14500 433 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 ZNF273Q14593 569 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 IL11RAQ14626 422 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 KARSQ15046 597 aaKnown RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 ZMYND11Q15326 602 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 LRRC24Q50LG9 513 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 CCDC178Q5BJE1 867 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 ZNF766Q5HY98 468 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 ADGRF1Q5T601 910 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 ATAD3BQ5T9A4 648 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 BTBD8Q5XKL5 378 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 SLFN12LQ6IEE8 588 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 CORO6Q6QEF8 472 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 TMC5Q6UXY8 1006 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 KIF6Q6ZMV9 814 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 KCTD1Q719H9 257 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 CCDC83Q8IWF9 413 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 RBM12BQ8IXT5 1001 aaKnown RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 IL22RA1Q8N6P7 574 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 GPR161Q8N6U8 529 aaKnown RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 ZNF366Q8N895 744 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 GBP7Q8N8V2 638 aaPredicted RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 NHLRC2Q8NBF2 726 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 TMEM116Q8NCL8 245 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 NCLNQ969V3 563 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 C19orf60Q96EN9 201 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 KLHDC7BQ96G42 594 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 ERO1AQ96HE7 468 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 INTS4Q96HW7 963 aaKnown RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 SAMD8Q96LT4 415 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 CATSPER2Q96P56 530 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 NUDCD1Q96RS6 583 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 GAD1Q99259 594 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 SEMA3CQ99985 751 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 ASCC2Q9H1I8 757 aaPredicted RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 ATXN3LQ9H3M9 355 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 EPB41L1Q9H4G0 881 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 C8orf33Q9H7E9 229 aaPredicted RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 NRDE2Q9H7Z3 1164 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 PARVGQ9HBI0 331 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 SMPD3Q9NY59 655 aaPredicted RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 ANKMY1Q9P2S6 941 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 NCDNQ9UBB6 729 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 DKK4Q9UBT3 224 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 RGS17Q9UGC6 210 aaPredicted RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 IPO11Q9UI26 975 aaKnown RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 NAGPAQ9UK23 515 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 ITGA11Q9UKX5 1188 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 BAG5Q9UL15 447 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 STX8Q9UNK0 236 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 STK38LQ9Y2H1 464 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 RWDD3Q9Y3V2 267 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 PCDHB6Q9Y5E3 794 aa5.42□□□□□ -1.54
PAF1-208ENST00000598594 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.42□□□□□ -1.54
PAF1-208ENST00000598594 DDX49Q9Y6V7 483 aaKnown RBP5.42□□□□□ -1.54
PAF1-208ENST00000598594 LOC100653049A0A140TA62 436 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 TCRBV21S2A2A0A5A6 115 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 PRAMEF22A3QJZ6 481 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 PMS2P1A4D2B8 440 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 GAGE10A6NGK3 116 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 FAM47DPA6NHR8 397 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SH2D7A6NKC9 451 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 PRR5-ARHGAP8B1AHC4 643 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 KIF28PB7ZC32 967 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 BIN1O00499 593 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 ATP2A1O14983 1001 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 NVLO15381 856 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 SEPT4O43236 478 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 RPP40O75818 363 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 IDH1O75874 414 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 KRT34O76011 436 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SCAF4O95104 1147 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 SIX3O95343 332 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 MT-ATP6P00846 226 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 VIPP01282 170 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 PROCP04070 461 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 GNAI2P04899 355 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 TPH1P17752 444 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 GABRB1P18505 474 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 ALDH1B1P30837 517 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 PRKAR1BP31321 381 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 S100A5P33763 92 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 CTNNB1P35222 781 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 ARL1P40616 181 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 WNT5AP41221 380 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 FASLGP48023 281 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 PIK3CGP48736 1102 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SNU13P55769 128 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 NPEPPSP55786 919 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 OLR1P78380 273 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 KCNC3Q14003 757 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 UBAP2LQ14157 1087 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 RCN1Q15293 331 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SLC9B1Q4ZJI4 515 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 RTP2Q5QGT7 225 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 PRAMEF18Q5VWM3 479 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 ARHGAP17Q68EM7 881 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 CDC73Q6P1J9 531 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 NOTUMQ6P988 496 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 OGFOD3Q6PK18 319 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms