RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 SRCP12931 536 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 ABCB4P21439 1286 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 GLDCP23378 1020 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 CCR1P32246 355 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 USP8P40818 1118 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 CDK17Q00537 523 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 NME3Q13232 169 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 SLC12A1Q13621 1099 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 PROX2Q3B8N5 592 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 PIP5KL1Q5T9C9 394 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 RNF219Q5W0B1 726 aaPredicted RBP11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 TRNP1Q6NT89 227 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 SLC47A2Q86VL8 602 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 SH2D3CQ8N5H7 860 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 TMEM145Q8NBT3 493 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 CHST14Q8NCH0 376 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 C1orf131Q8NDD1 294 aaKnown RBP11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 PIP4K2CQ8TBX8 421 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 VOPP1Q96AW1 172 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 RPRD1AQ96P16 312 aaPredicted RBP11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 NOX5Q96PH1 765 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 SPAG5Q96R06 1193 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 NPY6RQ99463 290 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 ERVMER34-1Q9H9K5 563 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 ASNSD1Q9NWL6 643 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 UCKL1Q9NWZ5 548 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 PCDHGC3Q9UN70 934 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 ZNF462Q96JM2 2506 aa11.33□□□□□ -0.6
GRAMD1A-209ENST00000598580 A0A0D9SEW6 157 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 DRGXA6NNA5 263 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 SIGLEC6O43699 453 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 RFPL3O75679 317 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 GLI1P08151 1106 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 MYF5P13349 255 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 JUPP14923 745 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 PRLRP16471 622 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 EIF2S3P41091 472 aaKnown RBP11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 PPP1R2P41236 205 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 CXCR3P49682 368 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 NUCB2P80303 420 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 SLC6A3Q01959 620 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 SULT2A1Q06520 285 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 ACCSLQ4AC99 568 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 RAB6CQ53S08 254 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 EFHC1Q5JVL4 640 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 HES3Q5TGS1 186 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 OR6B2Q6IFH4 312 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 C11orf57Q6ZUT1 292 aaPredicted RBP11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 SLC26A9Q7LBE3 791 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 TRIM69Q86WT6 500 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 CCDC117Q8IWD4 279 aaPredicted RBP11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 OR2A12Q8NGT7 310 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 NT5C3BQ969T7 300 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 MYOCQ99972 504 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 SIK2Q9H0K1 926 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 RAB6CQ9H0N0 254 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 APEX2Q9UBZ4 518 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 HOOK1Q9UJC3 728 aaKnown RBP11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 ZFR2Q9UPR6 939 aaKnown RBP11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 ACTL7AQ9Y615 435 aa11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 COL5A1P20908 1838 aaPredicted RBP11.32□□□□□ -0.6
GRAMD1A-209ENST00000598580 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 LY6G6EA0A0G2JKS1 128 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 A0A1W2PQU0 124 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 M0QYT0 321 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 SLC31A1O15431 190 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 SLC7A4O43246 635 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 BNIP3LO60238 219 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 RNGTTO60942 597 aaKnown RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 HSF2BPO75031 334 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 DAB1O75553 588 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 PRB1P04280 392 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 C1SP09871 688 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 SLC2A3P11169 496 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 CKMT2P17540 419 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 RRM1P23921 792 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 ARRB1P49407 418 aaPredicted RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 CLDN2P57739 230 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 INSM1Q01101 510 aaPredicted RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 SEMG2Q02383 582 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 SFSWAPQ12872 951 aaKnown RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 ZNF177Q13360 481 aaPredicted RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 FGL2Q14314 439 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 RTP5Q14D33 572 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 CAMK4Q16566 473 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 ZNF284Q2VY69 593 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 C2CD6Q53TS8 623 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 RABGAP1LQ5R372 815 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 TTC39BQ5VTQ0 682 aaPredicted RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 LINGO4Q6UY18 593 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 KDM7AQ6ZMT4 941 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 ENOSF1Q7L5Y1 443 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 PRPF39Q86UA1 669 aaKnown RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 IQCHQ86VS3 1027 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 ZNF397Q8NF99 534 aaPredicted RBP11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 OR8D1Q8WZ84 308 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 RNF34Q969K3 372 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
GRAMD1A-209ENST00000598580 TRIM62Q9BVG3 475 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms