RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SIGLEC16A6NMB1 481 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 C10orf142B7Z368 130 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 K7ERQ8 282 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 KCNK3O14649 394 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 SRCP12931 536 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 FERP16591 822 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 PTPN9P43378 593 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 CCR5P51681 352 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 FAM193AP78312 1265 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 SIM1P81133 766 aaPredicted RBP15.45■□□□□ 0.06
LIG1-215ENST00000597901 FOXC1Q12948 553 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 HNRNPDQ14103 355 aaKnown RBP15.45■□□□□ 0.06
LIG1-215ENST00000597901 TEAD4Q15561 434 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 ARL13BQ3SXY8 428 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 FAM46CQ5VWP2 391 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 CAVIN1Q6NZI2 390 aaKnown RBP15.45■□□□□ 0.06
LIG1-215ENST00000597901 WDR59Q6PJI9 974 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 STRADAQ7RTN6 431 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 DSG4Q86SJ6 1040 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 ATP11CQ8NB49 1132 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 SPON2Q9BUD6 331 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 MAGEB5Q9BZ81 275 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 ZYG11BQ9C0D3 744 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 OSBPL2Q9H1P3 480 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 SEPT11Q9NVA2 429 aaKnown RBP15.45■□□□□ 0.06
LIG1-215ENST00000597901 PPARGC1AQ9UBK2 798 aaKnown RBP15.45■□□□□ 0.06
LIG1-215ENST00000597901 ZNF212Q9UDV6 495 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 OR12D3Q9UGF7 316 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 VPS51Q9UID3 782 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 WASF3Q9UPY6 502 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 ANKRD6Q9Y2G4 727 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 SNX11Q9Y5W9 270 aa15.45■□□□□ 0.06
LIG1-215ENST00000597901 MUC22E2RYF6 1773 aaPredicted RBP15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3DA0A087WVF3 549 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3IA0A087WXS9 549 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3EA0A087X179 549 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3KA0A087X1G2 549 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3FA6NER0 549 aaPredicted RBP15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3LB9A6J9 549 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 PLK4O00444 970 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 SMAD6O43541 496 aaKnown RBP15.44■□□□□ 0.06
LIG1-215ENST00000597901 BNIP3LO60238 219 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 CER1O95813 267 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TOP3BO95985 862 aaKnown RBP15.44■□□□□ 0.06
LIG1-215ENST00000597901 CALB1P05937 261 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 CCDC172P0C7W6 258 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3HP0C7X1 549 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 ZNF883P0CG24 379 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 DRD3P35462 400 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 GRIA4P48058 902 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 ZNF165P49910 485 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 METAP1P53582 386 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 GSCP56915 257 aaPredicted RBP15.44■□□□□ 0.06
LIG1-215ENST00000597901 RACK1P63244 317 aaKnown RBP15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3GQ6DHY5 549 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3CQ6IPX1 549 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 ACAD10Q6JQN1 1059 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 ZNF783Q6ZMS7 281 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 DBX2Q6ZNG2 339 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 Q6ZVU0 165 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TBC1D3Q8IZP1 549 aaPredicted RBP15.44■□□□□ 0.06
LIG1-215ENST00000597901 OR7D4Q8NG98 312 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 SELENOOQ9BVL4 669 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 TM7SF3Q9NS93 570 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 PCDHB9Q9Y5E1 797 aa15.44■□□□□ 0.06
LIG1-215ENST00000597901 CNOT1A5YKK6 2376 aaKnown RBP15.44■□□□□ 0.06
LIG1-215ENST00000597901 FAM72CH0Y354 149 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 ALOX15BO15296 676 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 ZMPSTE24O75844 475 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 TNFAIP3P21580 790 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 GPD1P21695 349 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 GLDCP23378 1020 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 ADPRHP54922 357 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 HDAC4P56524 1084 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 NRG1Q02297 640 aaPredicted RBP15.43■□□□□ 0.06
LIG1-215ENST00000597901 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
LIG1-215ENST00000597901 SLC20A2Q08357 652 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 TRIP6Q15654 476 aaKnown RBP15.43■□□□□ 0.06
LIG1-215ENST00000597901 FILIP1LQ4L180 1135 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 KCNT1Q5JUK3 1230 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 FAM72AQ5TYM5 149 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 FAM72DQ6L9T8 149 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 LINGO4Q6UY18 593 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 MON1BQ7L1V2 547 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 FAM72BQ86X60 149 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 DCAF4L2Q8NA75 395 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 C3orf20Q8ND61 904 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 OR2A12Q8NGT7 310 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 PIP4K2CQ8TBX8 421 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 FAM172AQ8WUF8 416 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 BAP1Q92560 729 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 FAM131CQ96AQ9 280 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 NAP1L5Q96NT1 182 aaPredicted RBP15.43■□□□□ 0.06
LIG1-215ENST00000597901 MYO6Q9UM54 1294 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 FNDC3AQ9Y2H6 1198 aaKnown RBP15.43■□□□□ 0.06
LIG1-215ENST00000597901 FARP1Q9Y4F1 1045 aaPredicted RBP15.43■□□□□ 0.06
LIG1-215ENST00000597901 LAMA1P25391 3075 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 CEP192Q8TEP8 1941 aa15.43■□□□□ 0.06
LIG1-215ENST00000597901 PCDH15Q96QU1 1955 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 TCRBV5S1A1TA0A578 114 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms