RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 EPHB2P29323 1055 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 MIPP30301 263 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 ACCSLQ4AC99 568 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 ERMARDQ5T6L9 678 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 CYP4V2Q6ZWL3 525 aaPredicted RBP17.13■□□□□ 0.33
SSBP4-204ENST00000597724 ARMCX6Q7L4S7 300 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 CYP2U1Q7Z449 544 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 SLC41A1Q8IVJ1 513 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 STK40Q8N2I9 435 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 DEFB119Q8N690 84 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 ARHGEF26Q96DR7 871 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 PEBP4Q96S96 227 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 SPON2Q9BUD6 331 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 NUP85Q9BW27 656 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 VPS45Q9NRW7 570 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 GPATCH2LQ9NWQ4 482 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 PCSK1NQ9UHG2 260 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 DNAI1Q9UI46 699 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 SCML1Q9UN30 329 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 CHD5Q8TDI0 1954 aa17.13■□□□□ 0.33
SSBP4-204ENST00000597724 TNRC6BQ9UPQ9 1833 aaKnown RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 EIF3CLB5ME19 914 aaKnown RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 CBX4O00257 560 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 PRPSAP2O60256 369 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 ZMPSTE24O75844 475 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 GLDCP23378 1020 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 HTR7P34969 479 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 PCK1P35558 622 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 ETFBP38117 255 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 ZNF33AQ06730 810 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 SLC20A2Q08357 652 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 PIGHQ14442 188 aaPredicted RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 SF3A2Q15428 464 aaKnown RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 CST6Q15828 149 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 CA9Q16790 459 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 TTC31Q49AM3 519 aaPredicted RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 LYSMD4Q5XG99 296 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 LINGO4Q6UY18 593 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 PRR23CQ6ZRP0 262 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 RTL3Q8N8U3 475 aaKnown RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 ATP11CQ8NB49 1132 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 PIGKQ92643 395 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 ARHGEF2Q92974 986 aaKnown RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 ZNF419Q96HQ0 510 aaPredicted RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 EIF3CQ99613 913 aaKnown RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 SNRNP25Q9BV90 132 aaKnown RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 GPR174Q9BXC1 333 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 ACE2Q9BYF1 805 aaPredicted RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 MAGEH1Q9H213 219 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 DEF6Q9H4E7 631 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 SMOC1Q9H4F8 434 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 ATP13A1Q9HD20 1204 aa17.12■□□□□ 0.33
SSBP4-204ENST00000597724 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.12■□□□□ 0.33
SSBP4-204ENST00000597724 CXorf51AA0A1B0GTR3 108 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 WASH4PA8MWX3 477 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 K7ERQ8 282 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 SMAD6O43541 496 aaKnown RBP17.11■□□□□ 0.33
SSBP4-204ENST00000597724 AKR1B10O60218 316 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 ITPKAP23677 461 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 ACVRL1P37023 503 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 CLCN6P51797 869 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 ZNF75DP51815 510 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 LMNB2Q03252 620 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 ELAVL3Q14576 367 aaKnown RBP17.11■□□□□ 0.33
SSBP4-204ENST00000597724 DAB2IPQ5VWQ8 1189 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 IL31Q6EBC2 164 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 RETSATQ6NUM9 610 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 Q6ZVU0 165 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 USP30Q70CQ3 517 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 FAM124AQ86V42 546 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 SYT12Q8IV01 421 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 PSTKQ8IV42 348 aaKnown RBP17.11■□□□□ 0.33
SSBP4-204ENST00000597724 MMAAQ8IVH4 418 aaKnown RBP17.11■□□□□ 0.33
SSBP4-204ENST00000597724 NIPA2Q8N8Q9 360 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 CADM4Q8NFZ8 388 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 OR8D1Q8WZ84 308 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 FOXJ1Q92949 421 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 MRFAP1L1Q96HT8 127 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 CCDC42Q96M95 316 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 HSPA12BQ96MM6 686 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 PACSIN1Q9BY11 444 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 PABPC3Q9H361 631 aaKnown RBP17.11■□□□□ 0.33
SSBP4-204ENST00000597724 DHX35Q9H5Z1 703 aaKnown RBP17.11■□□□□ 0.33
SSBP4-204ENST00000597724 NOL6Q9H6R4 1146 aaKnown RBP17.11■□□□□ 0.33
SSBP4-204ENST00000597724 CATSPERBQ9H7T0 1116 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 NHEJ1Q9H9Q4 299 aaPredicted RBP17.11■□□□□ 0.33
SSBP4-204ENST00000597724 TMEM74BQ9NUR3 256 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 IP6K2Q9UHH9 426 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 ANAPC7Q9UJX3 599 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 PILRBQ9UKJ0 227 aa17.11■□□□□ 0.33
SSBP4-204ENST00000597724 NYNRINQ9P2P1 1898 aaKnown RBP17.1■□□□□ 0.33
SSBP4-204ENST00000597724 MCF2LO15068 1137 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 MID1O15344 667 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 FGF10O15520 208 aaPredicted RBP17.1■□□□□ 0.33
SSBP4-204ENST00000597724 RAMP2O60895 175 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 H2AFZP0C0S5 128 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 IL1R2P27930 398 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 SLC8A1P32418 973 aa17.1■□□□□ 0.33
SSBP4-204ENST00000597724 ACSL1P33121 698 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms