RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PCDH18Q9HCL0 1135 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 SLCO3A1Q9UIG8 710 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 HPCAL4Q9UM19 191 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 CEP192Q8TEP8 1941 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 THADAQ6YHU6 1953 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 FAM186AA6NE01 2351 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 TTC34A8MYJ7 566 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 ERCC2P18074 760 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 GABRG2P18507 467 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 GLDCP23378 1020 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 ACVRL1P37023 503 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 YBEYP58557 167 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 CAMK2GQ13555 558 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 HNRNPA1L2Q32P51 320 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 ACCSLQ4AC99 568 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 ATP13A4Q4VNC1 1196 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 RETSATQ6NUM9 610 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 KIAA1324Q6UXG2 1013 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 POLNQ7Z5Q5 900 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 LRRC8AQ8IWT6 810 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 CD248Q9HCU0 757 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 KLHL11Q9NVR0 708 aa20.12■□□□□ 0.81
SHKBP1-214ENST00000597396 DMDP11532 3685 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 EDDM13A0A1B0GTR0 161 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 PJA2O43164 708 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 ARHGAP6O43182 974 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 BUB1O43683 1085 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 BUB1BO60566 1050 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 TNNT1P13805 278 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 NDUFV2P19404 249 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 KIF5AQ12840 1032 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 DPYSQ14117 519 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 LINGO4Q6UY18 593 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 MAP7D3Q8IWC1 876 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 UMODL1-AS1Q8N2C9 162 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 SH2D3CQ8N5H7 860 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 ATP11CQ8NB49 1132 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 KCTD6Q8NC69 237 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 OR2T3Q8NH03 318 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 CALR3Q96L12 384 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 CSPG4P5Q96PW8 444 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 CALN1Q9BXU9 219 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 ACE2Q9BYF1 805 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 MTG2Q9H4K7 406 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 FBRSQ9HAH7 460 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 PRSS16Q9NQE7 514 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 HYOU1Q9Y4L1 999 aa20.11■□□□□ 0.81
SHKBP1-214ENST00000597396 TARSL2A2RTX5 802 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 BTNL10A8MVZ5 291 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 RASA4BC9J798 803 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 RASA4O43374 803 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 LILRB5O75023 590 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 SIN3BO75182 1162 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 COMTP21964 271 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 AMPD1P23109 780 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 CNR2P34972 360 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 VASPP50552 380 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 NDST2P52849 883 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 PDK2Q15119 407 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 DLG2Q15700 870 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 PARP15Q460N3 678 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 USP39Q53GS9 565 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 ODF2Q5BJF6 829 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 CEP68Q76N32 757 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 TMPRSS6Q8IU80 811 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 TPCN2Q8NHX9 752 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 HMCESQ96FZ2 354 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 MRGPRX1Q96LB2 322 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 LACRTQ9GZZ8 138 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 SLC6A17Q9H1V8 727 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 NOL6Q9H6R4 1146 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 PRDM16Q9HAZ2 1276 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 RCOR3Q9P2K3 495 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 SALL4Q9UJQ4 1053 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 HS3ST2Q9Y278 367 aa20.1■□□□□ 0.81
SHKBP1-214ENST00000597396 ARHGAP42A6NI28 874 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 ATP9BO43861 1147 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 RPP40O75818 363 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 ZMPSTE24O75844 475 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 MT-CO1P00395 513 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 SRCP12931 536 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 GEMIN4P57678 1058 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 ARF5P84085 180 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 SLC20A2Q08357 652 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 MMRN1Q13201 1228 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 SRSF5Q13243 272 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 C11orf63Q6NUN7 778 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 TMCO3Q6UWJ1 677 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 DAAM2Q86T65 1068 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 CACUL1Q86Y37 369 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 RHOT1Q8IXI2 618 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 LZTR1Q8N653 840 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 FAM71BQ8TC56 605 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 GAB3Q8WWW8 586 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 TSC1Q92574 1164 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 PRCCQ92733 491 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 SIPA1Q96FS4 1042 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 CELF6Q96J87 481 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 SPACA7Q96KW9 195 aa20.09■□□□□ 0.81
SHKBP1-214ENST00000597396 MKRN2Q9H000 416 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms