RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 KLHDC7BQ96G42 594 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 FEM1AQ9BSK4 669 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 THAP9Q9H5L6 903 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 LY6G6EA0A0G2JKS1 128 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 SLC31A1O15431 190 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 OPA1O60313 960 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 RNGTTO60942 597 aaKnown RBP10.24□□□□□ -0.77
LIG1-209ENST00000596104 PIAS2O75928 621 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 DXOO77932 396 aaKnown RBP10.24□□□□□ -0.77
LIG1-209ENST00000596104 CTSLP07711 333 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 THEGLP0DJG4 465 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 CKMT1AP12532 417 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
LIG1-209ENST00000596104 PRLRP16471 622 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 CCR1P32246 355 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 CXADRP78310 365 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 DAB2P98082 770 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 CFHR1Q03591 330 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 KCNMA1Q12791 1236 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 KCNH2Q12809 1159 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 AUHQ13825 339 aaKnown RBP10.24□□□□□ -0.77
LIG1-209ENST00000596104 ZNF284Q2VY69 593 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 ACCSLQ4AC99 568 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 CCDC40Q4G0X9 1142 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 RABGAP1LQ5R372 815 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 NEK5Q6P3R8 708 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 ZNF605Q86T29 641 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 TRIM59Q8IWR1 403 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 SH2D3CQ8N5H7 860 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 ZNF248Q8NDW4 579 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 OR13H1Q8NG92 308 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 ZNF606Q8WXB4 792 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 DHTKD1Q96HY7 919 aaPredicted RBP10.24□□□□□ -0.77
LIG1-209ENST00000596104 SLC2A13Q96QE2 648 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 MED15Q96RN5 788 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 LGMNQ99538 433 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 MYOCQ99972 504 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 GTPBP4Q9BZE4 634 aaKnown RBP10.24□□□□□ -0.77
LIG1-209ENST00000596104 ACP6Q9NPH0 428 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 DDIT4Q9NX09 232 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 SLC12A6Q9UHW9 1150 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 SLC25A13Q9UJS0 675 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 HS3ST2Q9Y278 367 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 U3KQA8 63 aa10.24□□□□□ -0.77
LIG1-209ENST00000596104 A0A1W2PQU0 124 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 ERVH48-1M5A8F1 160 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 RNF103O00237 685 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 PSMA7O14818 248 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 FFAR2O15552 330 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 LETM1O95202 739 aaPredicted RBP10.23□□□□□ -0.77
LIG1-209ENST00000596104 SMC2O95347 1197 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 MT-CO1P00395 513 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 MPOP05164 745 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 GLI1P08151 1106 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 SLC2A3P11169 496 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 SRCP12931 536 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 KRT5P13647 590 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 GGCXP38435 758 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 PCBP4P57723 403 aaKnown RBP10.23□□□□□ -0.77
LIG1-209ENST00000596104 CDK17Q00537 523 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 CETN1Q12798 172 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 PDCLQ13371 301 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 C5orf22Q49AR2 442 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 FOXR2Q6PJQ5 311 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 GCNT7Q6ZNI0 430 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 ABI3BPQ7Z7G0 1075 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 C14orf80Q86SX3 495 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 HORMAD1Q86X24 394 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 DEFB106AQ8N104 65 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 SLC22A18ASQ8N1D0 253 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 OR2A12Q8NGT7 310 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 KLK6Q92876 244 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 SMARCE1Q969G3 411 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 ARRDC3Q96B67 414 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 NAF1Q96HR8 494 aaKnown RBP10.23□□□□□ -0.77
LIG1-209ENST00000596104 ZNF578Q96N58 590 aaPredicted RBP10.23□□□□□ -0.77
LIG1-209ENST00000596104 RPRD1AQ96P16 312 aaPredicted RBP10.23□□□□□ -0.77
LIG1-209ENST00000596104 NOX5Q96PH1 765 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 PPP1R9BQ96SB3 815 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 PSMB7Q99436 277 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 INTS2Q9H0H0 1204 aaKnown RBP10.23□□□□□ -0.77
LIG1-209ENST00000596104 FAM204AQ9H8W3 233 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 FZD3Q9NPG1 666 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 GPR27Q9NS67 375 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 ASNSD1Q9NWL6 643 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 VPS28Q9UK41 221 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 VANGL2Q9ULK5 521 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 ZFR2Q9UPR6 939 aaKnown RBP10.23□□□□□ -0.77
LIG1-209ENST00000596104 TBC1D30Q9Y2I9 924 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 ATP6V1DQ9Y5K8 247 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 HS3ST4Q9Y661 456 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 MGAQ8IWI9 3026 aa10.23□□□□□ -0.77
LIG1-209ENST00000596104 SYNJ2BP-COX16A0A087WUM0 186 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.22□□□□□ -0.77
LIG1-209ENST00000596104 BECN2A8MW95 431 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 K7ERQ8 282 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 MED7O43513 233 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 BNIP3LO60238 219 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 LZTS3O60299 673 aaPredicted RBP10.22□□□□□ -0.77
LIG1-209ENST00000596104 SNAP91O60641 907 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms