RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 OR52K2Q8NGK3 314 aa15.52■□□□□ 0.07
VRK3-207ENST00000594092 TMA16Q96EY4 203 aaKnown RBP15.52■□□□□ 0.07
VRK3-207ENST00000594092 CDC42EP4Q9H3Q1 356 aaKnown RBP15.52■□□□□ 0.07
VRK3-207ENST00000594092 IGSF9Q9P2J2 1179 aa15.52■□□□□ 0.07
VRK3-207ENST00000594092 TRHDEQ9UKU6 1024 aa15.52■□□□□ 0.07
VRK3-207ENST00000594092 C2orf16Q68DN1 1984 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 GOLGA6L10A6NI86 522 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 F5H423 210 aaPredicted RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 J3KR12 359 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 ZBTB24O43167 697 aaPredicted RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 RIPK2O43353 540 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 TBL1XO60907 577 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 RNF40O75150 1001 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 NUDT17P0C025 328 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 PSMB4P28070 264 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 CD68P34810 354 aaPredicted RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 ACVRL1P37023 503 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 ZNF177Q13360 481 aaPredicted RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 CBX2Q14781 532 aaPredicted RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 PARP6Q2NL67 630 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 CEP85LQ5SZL2 805 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 RELL1Q8IUW5 271 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 CNTD1Q8N815 330 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 TDRD5Q8NAT2 981 aaKnown RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 USP33Q8TEY7 942 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 MAML1Q92585 1016 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 ARHGEF2Q92974 986 aaKnown RBP15.51■□□□□ 0.07
VRK3-207ENST00000594092 EXOC4Q96A65 974 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 TEKT5Q96M29 485 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 AGAP3Q96P47 875 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 RBM15Q96T37 977 aaKnown RBP eCLIP15.51■□□□□ 0.07
VRK3-207ENST00000594092 IL12RB2Q99665 862 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 MAGEH1Q9H213 219 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 EPB41L4BQ9H329 900 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 TBC1D30Q9Y2I9 924 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 NFS1Q9Y697 457 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 CHD5Q8TDI0 1954 aa15.51■□□□□ 0.07
VRK3-207ENST00000594092 A0A0D9SEW6 157 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 PEX11BO96011 259 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 APRTP07741 180 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 GNA12Q03113 381 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 C6orf118Q5T5N4 469 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 CXorf57Q6NSI4 855 aaKnown RBP15.5■□□□□ 0.07
VRK3-207ENST00000594092 CENPUQ71F23 418 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 SETD3Q86TU7 594 aaPredicted RBP15.5■□□□□ 0.07
VRK3-207ENST00000594092 ZNF354CQ86Y25 554 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 ARID3BQ8IVW6 561 aaPredicted RBP15.5■□□□□ 0.07
VRK3-207ENST00000594092 FATE1Q969F0 183 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 ZNF419Q96HQ0 510 aaPredicted RBP15.5■□□□□ 0.07
VRK3-207ENST00000594092 PKNOX2Q96KN3 472 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 APOL5Q9BWW9 433 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 ILVBLA1L0T0 632 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 TYW5A2RUC4 315 aaKnown RBP15.5■□□□□ 0.07
VRK3-207ENST00000594092 POLR3GO15318 223 aaPredicted RBP15.5■□□□□ 0.07
VRK3-207ENST00000594092 RHOCP08134 193 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 TCF3P15923 654 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 TPSB2P20231 275 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 ZNF844Q08AG5 666 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 USP4Q13107 963 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 SLC29A2Q14542 456 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 TPSAB1Q15661 275 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 ZNF77Q15935 545 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 ANO4Q32M45 955 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 ANKRD54Q6NXT1 300 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 SYCE2Q6PIF2 218 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 GPR149Q86SP6 731 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 OR7D4Q8NG98 312 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 OR2W6PQ8NHA6 318 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 GORASP1Q9BQQ3 440 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 GBA3Q9H227 469 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 SP110Q9HB58 689 aa15.5■□□□□ 0.07
VRK3-207ENST00000594092 REV3LO60673 3130 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 E7EVH7 732 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 LUC7L3O95232 432 aaKnown RBP15.49■□□□□ 0.07
VRK3-207ENST00000594092 TTC4O95801 387 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 MYZAPP0CAP1 466 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 NFKB1P19838 968 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 HOXD9P28356 352 aaPredicted RBP15.49■□□□□ 0.07
VRK3-207ENST00000594092 ARL4CP56559 192 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 IL10RBQ08334 325 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 HNRNPDQ14103 355 aaKnown RBP15.49■□□□□ 0.07
VRK3-207ENST00000594092 HIF1AQ16665 826 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 MPPE1Q53F39 396 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 FNBP1LQ5T0N5 605 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 UBAP2Q5T6F2 1119 aaKnown RBP15.49■□□□□ 0.07
VRK3-207ENST00000594092 ITPRIPL1Q6GPH6 555 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 PPP1R21Q6ZMI0 780 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 CARNMT1Q8N4J0 409 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 MCUQ8NE86 351 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 DDI1Q8WTU0 396 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 BHMTQ93088 406 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 PHACTR1Q9C0D0 580 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 SAYSD1Q9NPB0 183 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 RBM22Q9NW64 420 aaKnown RBP eCLIP15.49■□□□□ 0.07
VRK3-207ENST00000594092 VPS18Q9P253 973 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 RSPH14Q9UHP6 348 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 CDH22Q9UJ99 828 aa15.49■□□□□ 0.07
VRK3-207ENST00000594092 H0Y626 953 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms