RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 LRRC23Q53EV4 343 aaPredicted RBP16.83■□□□□ 0.28
LIG1-206ENST00000594067 SPATA24Q86W54 205 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 FBXW8Q8N3Y1 598 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 URGCPQ8TCY9 931 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 ISL2Q96A47 359 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 TNIP3Q96KP6 325 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 BTBD9Q96Q07 612 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 EPB41L1Q9H4G0 881 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 PIN4Q9Y237 131 aaKnown RBP16.83■□□□□ 0.28
LIG1-206ENST00000594067 SMIM31A0A1B0GVY4 71 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 RBM47A0AV96 593 aaKnown RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 CCDC78A2IDD5 438 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 PEX1O43933 1283 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 C2P06681 752 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 TPH1P17752 444 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 FOLH1Q04609 750 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 SDCCAG8Q86SQ7 713 aaPredicted RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 TMEM135Q86UB9 458 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 SIX6OS1Q8N1H7 587 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 TDRD5Q8NAT2 981 aaKnown RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 OR6J1Q8NGC5 347 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 FAM81AQ8TBF8 368 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 HNRNPABQ99729 332 aaKnown RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 PRDM16Q9HAZ2 1276 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 CLIC5Q9NZA1 410 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 G3BP2Q9UN86 482 aaKnown RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 ZNF638Q14966 1978 aaKnown RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 I6L893 689 aaPredicted RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 PDLIM1O00151 329 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 NRP1O14786 923 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 NPR3P17342 541 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 IGFBP6P24592 240 aaPredicted RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 ADRA1BP35368 520 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 CCR10P46092 362 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 MAP3K7CLP57077 242 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 FSCBQ5H9T9 825 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 PAQR9Q6ZVX9 377 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 BNIPLQ7Z465 357 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 CTU1Q7Z7A3 348 aaKnown RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.82■□□□□ 0.28
LIG1-206ENST00000594067 CDCA5Q96FF9 252 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 MED10Q9BTT4 135 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 IARS2Q9NSE4 1012 aaKnown RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 C20orf96Q9NUD7 363 aaPredicted RBP16.82■□□□□ 0.28
LIG1-206ENST00000594067 ARHGAP26Q9UNA1 814 aa16.82■□□□□ 0.28
LIG1-206ENST00000594067 TXNDC9O14530 226 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 TRIM13O60858 407 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 SAT1P21673 171 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 CD68P34810 354 aaPredicted RBP16.81■□□□□ 0.28
LIG1-206ENST00000594067 SERPINB5P36952 375 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 TKTL1P51854 596 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 MTTPP55157 894 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 OGFRL1Q5TC84 451 aaPredicted RBP16.81■□□□□ 0.28
LIG1-206ENST00000594067 KCNMB4Q86W47 210 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 NPWQ8N729 165 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 PIP4K2CQ8TBX8 421 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 LENG8Q96PV6 779 aaPredicted RBP16.81■□□□□ 0.28
LIG1-206ENST00000594067 GCNAQ96QF7 691 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 MLPHQ9BV36 600 aaPredicted RBP16.81■□□□□ 0.28
LIG1-206ENST00000594067 GATA5Q9BWX5 397 aaPredicted RBP16.81■□□□□ 0.28
LIG1-206ENST00000594067 WDR55Q9H6Y2 383 aaPredicted RBP16.81■□□□□ 0.28
LIG1-206ENST00000594067 NMRAL1Q9HBL8 299 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 CASS4Q9NQ75 786 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 CHRAC1Q9NRG0 131 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 UBP1Q9NZI7 540 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 ATXN10Q9UBB4 475 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 CAPN8A6NHC0 703 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 NEMP1O14524 444 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 PGM3O95394 542 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 MPOP05164 745 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 CHRNGP07510 517 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 SMIM18P0DKX4 95 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 DARSP14868 501 aaKnown RBP16.81■□□□□ 0.28
LIG1-206ENST00000594067 MPSTP25325 297 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 GJA5P36382 358 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 TPI1P60174 286 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 SNAPC2Q13487 334 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 PPP2R5DQ14738 602 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 GRAMD1BQ3KR37 738 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 ARMC3Q5W041 872 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 CLEC20AQ6ZU45 233 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 TMC7Q7Z402 723 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 CLEC14AQ86T13 490 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 ICA1LQ8NDH6 482 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 GPRC5AQ8NFJ5 357 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 TMEM40Q8WWA1 233 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 NMD3Q96D46 503 aaKnown RBP16.81■□□□□ 0.28
LIG1-206ENST00000594067 INPP5FQ9Y2H2 1132 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 SNX10Q9Y5X0 201 aa16.81■□□□□ 0.28
LIG1-206ENST00000594067 C15orf38-AP3S2A0A0A6YYH1 394 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 FYNP06241 537 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 PTPN1P18031 435 aaKnown RBP16.8■□□□□ 0.28
LIG1-206ENST00000594067 PNPLA4P41247 253 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 LILRA4P59901 499 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 CCNA1P78396 465 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 ZBTB17Q13105 803 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 MPP3Q13368 585 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 TLR1Q15399 786 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 SV2CQ496J9 727 aa16.8■□□□□ 0.28
LIG1-206ENST00000594067 ARPINQ7Z6K5 226 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms