RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 DCAF4L2Q8NA75 395 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 C1orf216Q8TAB5 229 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 C2orf49Q9BVC5 232 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 BTBD1Q9H0C5 482 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 SGK2Q9HBY8 427 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 NDFIP2Q9NV92 336 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 PARVAQ9NVD7 372 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 FBXL12Q9NXK8 326 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 SLC6A14Q9UN76 642 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 ANKRD62A6NC57 917 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 K7ERQ8 282 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 RTN2O75298 545 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 ZMPSTE24O75844 475 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 SEMA4FO95754 770 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 GYPCP04921 128 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 SRCP12931 536 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 ENGP17813 658 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 KCNA4P22459 653 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 GLDCP23378 1020 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 ZBED6P86452 979 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 ACCSLQ4AC99 568 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 SCYL2Q6P3W7 929 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 RABEPKQ7Z6M1 372 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 DRC7Q8IY82 874 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 PYROXD2Q8N2H3 581 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 AADATQ8N5Z0 425 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 CPLX3Q8WVH0 158 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 TRIM7Q9C029 511 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 XPO4Q9C0E2 1151 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 ISCUQ9H1K1 167 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 NEUROG2Q9H2A3 272 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 RETREG1Q9H6L5 497 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 TMEM9BQ9NQ34 198 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 FZD10Q9ULW2 581 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 ASCC3Q8N3C0 2202 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 KNL1Q8NG31 2342 aa18.94■□□□□ 0.62
SHKBP1-202ENST00000593764 A0A1W2PP55 124 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 TMEM191CA6NGB0 347 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 MEI4A8MW99 385 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 C10orf142B7Z368 130 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 SMAD6O43541 496 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 RHOQP17081 205 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 L1CAMP32004 1257 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 PSMD8P48556 350 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 METAP1P53582 386 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 FOXK2Q01167 660 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 GNA12Q03113 381 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 ZNF252P-AS1Q0IIN9 211 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 IL31Q6EBC2 164 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 RWDD4Q6NW29 188 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 LRSAM1Q6UWE0 723 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 LINGO4Q6UY18 593 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 Q6ZVU0 165 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 TMC6Q7Z403 805 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 ARFGAP1Q8N6T3 406 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 IQCDQ96DY2 449 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 TMEM248Q9NWD8 314 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 ADAMTS1Q9UHI8 967 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 EIF2B4Q9UI10 523 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 SARDHQ9UL12 918 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 NCKAP1Q9Y2A7 1128 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 BZW2Q9Y6E2 419 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 SLCO1B1Q9Y6L6 691 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 NCOR2Q9Y618 2525 aa18.93■□□□□ 0.62
SHKBP1-202ENST00000593764 PCDH15Q96QU1 1955 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 MED19A0JLT2 244 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 MCF2LO15068 1137 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 ZNF821O75541 412 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 ADH1BP00325 375 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 IL1BP01584 269 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 C5AR1P21730 350 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 DRD3P35462 400 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 ACVRL1P37023 503 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 GALCP54803 685 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 GFPT1Q06210 699 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 SEMA3BQ13214 749 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 ATP11CQ8NB49 1132 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 GANCQ8TET4 914 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 BIRC7Q96CA5 298 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 TBC1D31Q96DN5 1066 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 SPON2Q9BUD6 331 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 ACE2Q9BYF1 805 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 TSPY26PQ9H489 355 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 CNOT8Q9UFF9 292 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 SUSD2Q9UGT4 822 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 PPM1HQ9ULR3 514 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 LUC7L2Q9Y383 392 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 ADAMTS9Q9P2N4 1935 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 CHD5Q8TDI0 1954 aa18.92■□□□□ 0.62
SHKBP1-202ENST00000593764 NYNRINQ9P2P1 1898 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 CBX4O00257 560 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 ARHGAP33O14559 1287 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 RNASEH2AO75792 299 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 CD160O95971 181 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 SERPING1P05155 500 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 GNSP15586 552 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 GOT1P17174 413 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 MAPK8P45983 427 aa18.91■□□□□ 0.62
SHKBP1-202ENST00000593764 MAPKAPK2P49137 400 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms