RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 CCDC117Q8IWD4 279 aaPredicted RBP13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 KATNAL2Q8IYT4 538 aa13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 FAM160A2Q8N612 972 aaPredicted RBP13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 TSC1Q92574 1164 aa13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 ALG3Q92685 438 aa13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 MS4A14Q96JA4 679 aa13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
LDLRAD4-219ENST00000593236 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 C3orf70A6NLC5 250 aaPredicted RBP13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 FGF10O15520 208 aaPredicted RBP13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CLDN11O75508 207 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 RHOCP08134 193 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CTAGE8P0CG41 777 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 RHOQP17081 205 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ERCC2P18074 760 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 AMPD1P23109 780 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CD70P32970 193 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 HTR7P34969 479 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 DGKGP49619 791 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 LMAN2Q12907 356 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ZNF177Q13360 481 aaPredicted RBP13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 DPYSQ14117 519 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 PDK2Q15119 407 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 FSCBQ5H9T9 825 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 RNF43Q68DV7 783 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CXorf57Q6NSI4 855 aaKnown RBP13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 PKN3Q6P5Z2 889 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 MFSD7Q6UXD7 560 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ANKS1BQ7Z6G8 1248 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 WDR5BQ86VZ2 330 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 SFTPA1Q8IWL2 248 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CTAGE4Q8IX94 777 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 SYNPOQ8N3V7 929 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 RASGEF1CQ8N431 466 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 RTL3Q8N8U3 475 aaKnown RBP13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 NETO2Q8NC67 525 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 OR52K2Q8NGK3 314 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 FAM71BQ8TC56 605 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ACTRT1Q8TDG2 376 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 P2RY13Q9BPV8 354 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ZNF670Q9BS34 389 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 CATSPERBQ9H7T0 1116 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 FBRSL1Q9HCM7 1045 aaKnown RBP13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ABCB8Q9NUT2 735 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 NDFIP2Q9NV92 336 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ETNK2Q9NVF9 386 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 DEC1Q9P2X7 70 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 ZNF212Q9UDV6 495 aa13.15□□□□□ -0.3
LDLRAD4-219ENST00000593236 SDK1Q7Z5N4 2213 aa13.15□□□□□ -0.31
LDLRAD4-219ENST00000593236 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 CISD3P0C7P0 127 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 IL4RP24394 825 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 HLA-FP30511 346 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 OR1E1P30953 314 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 CSKP41240 450 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 GALK1P51570 392 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 ZNF135P52742 658 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 ZNF211Q13398 564 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 ANKRD20A8PQ5CZ79 823 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 KAZNQ674X7 775 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 AADACL2Q6P093 401 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 SPOCD1Q6ZMY3 1216 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 CEP68Q76N32 757 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 ZNF572Q7Z3I7 529 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 RFX6Q8HWS3 928 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 MAP7D3Q8IWC1 876 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 PHTF2Q8N3S3 785 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 PCDH19Q8TAB3 1148 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 FIBINQ8TAL6 211 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 RBM41Q96IZ5 413 aaKnown RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 CELF6Q96J87 481 aaKnown RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 PNKPQ96T60 521 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 TMEM248Q9NWD8 314 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 RCOR3Q9P2K3 495 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 GGA2Q9UJY4 613 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 FBXO10Q9UK96 956 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 TTC7AQ9ULT0 858 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 ATG2BQ96BY7 2078 aa13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 MAP1BP46821 2468 aaKnown RBP13.14□□□□□ -0.31
LDLRAD4-219ENST00000593236 DCLK1O15075 740 aa13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 AXIN1O15169 862 aa13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 KAT7O95251 611 aa13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 EGFP01133 1207 aa13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 APODP05090 189 aa13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 PYGMP11217 842 aa13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 PABPC1P11940 636 aaKnown RBP13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 KRT10P13645 584 aa13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 MZF1P28698 734 aaPredicted RBP13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 EIF2DP41214 584 aaKnown RBP13.13□□□□□ -0.31
LDLRAD4-219ENST00000593236 CDKN2BP42772 138 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms