RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 EXOC4Q96A65 974 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 TMA16Q96EY4 203 aaKnown RBP11.63□□□□□ -0.55
TUBD1-211ENST00000591548 ZIM3Q96PE6 472 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 MAGEH1Q9H213 219 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 CDC42EP4Q9H3Q1 356 aaKnown RBP11.63□□□□□ -0.55
TUBD1-211ENST00000591548 FAM53CQ9NYF3 392 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 ZNF510Q9Y2H8 683 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 MRPS23Q9Y3D9 190 aaKnown RBP11.63□□□□□ -0.55
TUBD1-211ENST00000591548 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ILVBLA1L0T0 632 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 RIPK2O43353 540 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 AVILO75366 819 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 BANF1O75531 89 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 NFKB1P19838 968 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 TPSB2P20231 275 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 MAGEA4P43358 317 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 NUMBP49757 651 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 IL10RBQ08334 325 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ZNF177Q13360 481 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 MTM1Q13496 603 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 FASTKD3Q14CZ7 662 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 TPSAB1Q15661 275 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 KYNUQ16719 465 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 FSCBQ5H9T9 825 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 RARS2Q5T160 578 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 C6orf118Q5T5N4 469 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ALS2CLQ60I27 953 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 CXorf57Q6NSI4 855 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ZNF534Q76KX8 674 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 TRMT10CQ7L0Y3 403 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 OTOP3Q7RTS5 596 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 SETD3Q86TU7 594 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 CAND1Q86VP6 1230 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ARID3BQ8IVW6 561 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 TDRD5Q8NAT2 981 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 HJURPQ8NCD3 748 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 MCUQ8NE86 351 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 OR7D4Q8NG98 312 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 PPP2R3CQ969Q6 453 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 SERPINB12Q96P63 405 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 GBA3Q9H227 469 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ZNF576Q9H609 170 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 NSUN3Q9H649 340 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 SAYSD1Q9NPB0 183 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 DZANK1Q9NVP4 752 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 RSPH14Q9UHP6 348 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 CDH22Q9UJ99 828 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 PLAAQ9Y263 795 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 NFS1Q9Y697 457 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 CHD5Q8TDI0 1954 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 SZT2Q5T011 3432 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 GOLGA6BA6NDN3 693 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 E7ESA3 106 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 E7EVH7 732 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ALOX15BO15296 676 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 CACNG3O60359 315 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 PRAMEF11O60813 436 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 TTC4O95801 387 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 HLA-DQB2P05538 268 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 HOXD9P28356 352 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 GRIA1P42261 906 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ARL4CP56559 192 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 SLC10A7Q0GE19 358 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 PDIA2Q13087 525 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 CBLBQ13191 982 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 HNRNPDQ14103 355 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 SLC29A2Q14542 456 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ZNF77Q15935 545 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ANO4Q32M45 955 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 HP1BP3Q5SSJ5 553 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ITPRIPL1Q6GPH6 555 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 LEKR1Q6ZMV7 388 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 CENPUQ71F23 418 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 MTERF4Q7Z6M4 381 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ZNF354CQ86Y25 554 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 PDIK1LQ8N165 341 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 AGGF1Q8N302 714 aaeCLIP11.62□□□□□ -0.554e-12■■■■□ 25.9
TUBD1-211ENST00000591548 CARNMT1Q8N4J0 409 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 EFHBQ8N7U6 833 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 OR2W6PQ8NHA6 318 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 BHMTQ93088 406 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 C9orf72Q96LT7 481 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 WDR83Q9BRX9 315 aaKnown RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 MLPHQ9BV36 600 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 APOL5Q9BWW9 433 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 PHACTR1Q9C0D0 580 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 SP110Q9HB58 689 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 PDFQ9HBH1 243 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 RBM22Q9NW64 420 aaKnown RBP eCLIP11.62□□□□□ -0.55
TUBD1-211ENST00000591548 NINJ2Q9NZG7 142 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 ZMYM5Q9UJ78 669 aa11.62□□□□□ -0.55
TUBD1-211ENST00000591548 C2orf16Q68DN1 1984 aa11.61□□□□□ -0.55
TUBD1-211ENST00000591548 H0Y626 953 aa11.61□□□□□ -0.55
TUBD1-211ENST00000591548 LUC7L3O95232 432 aaKnown RBP11.61□□□□□ -0.55
TUBD1-211ENST00000591548 RHOCP08134 193 aa11.61□□□□□ -0.55
TUBD1-211ENST00000591548 TCF3P15923 654 aa11.61□□□□□ -0.55
TUBD1-211ENST00000591548 GLDCP23378 1020 aa11.61□□□□□ -0.55
TUBD1-211ENST00000591548 MAGEA3P43357 314 aa11.61□□□□□ -0.55
TUBD1-211ENST00000591548 RGS19P49795 217 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms