RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CD38P28907 300 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 DRD3P35462 400 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 ADPRHP54922 357 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 SNX16P57768 344 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 PTK2Q05397 1052 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 AUHQ13825 339 aaKnown RBP10.71□□□□□ -0.69
VPS4B-207ENST00000591519 EXOC3L4Q17RC7 722 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 RABGAP1LQ5R372 815 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 RNF219Q5W0B1 726 aaPredicted RBP10.71□□□□□ -0.69
VPS4B-207ENST00000591519 CXorf57Q6NSI4 855 aaKnown RBP10.71□□□□□ -0.69
VPS4B-207ENST00000591519 GJB7Q6PEY0 223 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 ANKRD11Q6UB99 2663 aaPredicted RBP10.71□□□□□ -0.69
VPS4B-207ENST00000591519 LAYNQ6UX15 382 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 C11orf57Q6ZUT1 292 aaPredicted RBP10.71□□□□□ -0.69
VPS4B-207ENST00000591519 ADAT2Q7Z6V5 191 aaKnown RBP10.71□□□□□ -0.69
VPS4B-207ENST00000591519 STK40Q8N2I9 435 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 ZNF397Q8NF99 534 aaPredicted RBP10.71□□□□□ -0.69
VPS4B-207ENST00000591519 FEM1AQ9BSK4 669 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 ERVMER34-1Q9H9K5 563 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 ATP13A2Q9NQ11 1180 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 TMEM51Q9NW97 253 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 DDIT4Q9NX09 232 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 TBC1D30Q9Y2I9 924 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 GPSM3Q9Y4H4 160 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 PCDHGA1Q9Y5H4 931 aa10.71□□□□□ -0.69
VPS4B-207ENST00000591519 FOXN3O00409 490 aaPredicted RBP10.7□□□□□ -0.7
VPS4B-207ENST00000591519 PES1O00541 588 aaKnown RBP10.7□□□□□ -0.7
VPS4B-207ENST00000591519 WNT9AO14904 365 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 MCF2LO15068 1137 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 YKT6O15498 198 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 IL1BP01584 269 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 CDK4P11802 303 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 PRKCSHP14314 528 aaPredicted RBP10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SNRPBP14678 240 aaKnown RBP10.7□□□□□ -0.7
VPS4B-207ENST00000591519 PDGFRAP16234 1089 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 NOS2P35228 1153 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 CLCN1P35523 988 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 NUDT1P36639 197 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 USP8P40818 1118 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 RXRGP48443 463 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 STK19P49842 368 aaPredicted RBP10.7□□□□□ -0.7
VPS4B-207ENST00000591519 C21orf59P57076 290 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SKOR1P84550 965 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SLC6A3Q01959 620 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SHBQ15464 509 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 ARHGAP44Q17R89 818 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 INAVAQ3KP66 663 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 DPY19L2P1Q6NXN4 242 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 OLFML1Q6UWY5 402 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SLC26A9Q7LBE3 791 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 ZDHHC17Q8IUH5 632 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 MFSD2AQ8NA29 543 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 OR14C36Q8NHC7 312 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SAP25Q8TEE9 199 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 HPS1Q92902 700 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 NT5C3BQ969T7 300 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SLC6A18Q96N87 628 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 NOX5Q96PH1 765 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SPAG5Q96R06 1193 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 SIX2Q9NPC8 291 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 RRN3Q9NYV6 651 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 ARHGAP20Q9P2F6 1191 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 PPM1HQ9ULR3 514 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 CEP83Q9Y592 693 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 ZFYVE26Q68DK2 2539 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 CACNA1GO43497 2377 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 GOLGA4Q13439 2230 aaKnown RBP10.7□□□□□ -0.7
VPS4B-207ENST00000591519 FREM2Q5SZK8 3169 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 PLXNA2O75051 1894 aa10.7□□□□□ -0.7
VPS4B-207ENST00000591519 COL5A1P20908 1838 aaPredicted RBP10.7□□□□□ -0.7
VPS4B-207ENST00000591519 ACACAQ13085 2346 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 DSPP15924 2871 aaKnown RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3DA0A087WVF3 549 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3IA0A087WXS9 549 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3EA0A087X179 549 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3KA0A087X1G2 549 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3FA6NER0 549 aaPredicted RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TRABD2BA6NFA1 517 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3LB9A6J9 549 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 E9PAM4 449 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TLR4O00206 839 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 ALOX15BO15296 676 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 CLDN11O75508 207 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 C1SP09871 688 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3HP0C7X1 549 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 VAV1P15498 845 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 CDH5P33151 784 aaPredicted RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 KRT9P35527 623 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 PSMD8P48556 350 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 CXCR3P49682 368 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 APBA1Q02410 837 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 OVGP1Q12889 678 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 ZNF177Q13360 481 aaPredicted RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 STX1AQ16623 288 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 SLC45A4Q5BKX6 768 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 PRAMEF14Q5SWL7 426 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 FAM46CQ5VWP2 391 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3GQ6DHY5 549 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3CQ6IPX1 549 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms