RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CCRL2O00421 344 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 LTFP02788 710 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 ADSLP30566 484 aaPredicted RBP15.46■□□□□ 0.07
CIRBP-228ENST00000590347 LRRC8EQ6NSJ5 796 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 ZFP1Q6P2D0 407 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 TDRD5Q8NAT2 981 aaKnown RBP15.46■□□□□ 0.07
CIRBP-228ENST00000590347 ELMO1Q92556 727 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 ZDHHC15Q96MV8 337 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 NANOGQ9H9S0 305 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 CAB39LQ9H9S4 337 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 PARVAQ9NVD7 372 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 RIC8BQ9NVN3 520 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 GPATCH2LQ9NWQ4 482 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 RBAKQ9NYW8 714 aaPredicted RBP15.46■□□□□ 0.07
CIRBP-228ENST00000590347 FETUBQ9UGM5 382 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 CNOT6Q9ULM6 557 aaKnown RBP15.46■□□□□ 0.07
CIRBP-228ENST00000590347 TAF4O00268 1085 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 OSBPP22059 807 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 ACOT2P49753 483 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 SEPHS1P49903 392 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 COPZ1P61923 177 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 SH3PXD2AQ5TCZ1 1133 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 C16orf89Q6UX73 402 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 SIAH1Q8IUQ4 282 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 CANT1Q8WVQ1 401 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 ZNF516Q92618 1163 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 TRIT1Q9H3H1 467 aaKnown RBP15.46■□□□□ 0.07
CIRBP-228ENST00000590347 TRPV5Q9NQA5 729 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 DNMT3BQ9UBC3 853 aaKnown RBP15.46■□□□□ 0.07
CIRBP-228ENST00000590347 DKK3Q9UBP4 350 aa15.46■□□□□ 0.07
CIRBP-228ENST00000590347 CCDC78A2IDD5 438 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 TMEM191CA6NGB0 347 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 TNFRSF10AO00220 468 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 ACOT8O14734 319 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 JRKO75564 520 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 BCAS2O75934 225 aaPredicted RBP15.46■□□□□ 0.06
CIRBP-228ENST00000590347 ELK4P28324 431 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 PRKCQQ04759 706 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 OXA1LQ15070 435 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 CDO1Q16878 200 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 TREML2Q5T2D2 321 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 SCARA5Q6ZMJ2 495 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 CAND1Q86VP6 1230 aaKnown RBP15.46■□□□□ 0.06
CIRBP-228ENST00000590347 FLAD1Q8NFF5 587 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 ZFP90Q8TF47 636 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 FAM20AQ96MK3 541 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 TMEM8AQ9HCN3 771 aa15.46■□□□□ 0.06
CIRBP-228ENST00000590347 A8MV72 311 aaPredicted RBP15.45■□□□□ 0.06
CIRBP-228ENST00000590347 BMPR1AP36894 532 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 PRKAA2P54646 552 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 SPCS2Q15005 226 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 DPH6Q7L8W6 267 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 SLC22A16Q86VW1 577 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 NACC1Q96RE7 527 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 CEP41Q9BYV8 373 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 CCDC68Q9H2F9 335 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 LTB4R2Q9NPC1 389 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 RGS17Q9UGC6 210 aaPredicted RBP15.45■□□□□ 0.06
CIRBP-228ENST00000590347 EGFL7Q9UHF1 273 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 NAV1Q8NEY1 1877 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 IGKV6D-41A0A0C4DH26 115 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 NHSL2Q5HYW2 709 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 RALGPS2Q86X27 583 aaPredicted RBP15.45■□□□□ 0.06
CIRBP-228ENST00000590347 SLC9A9Q8IVB4 645 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 ARFGAP1Q8N6T3 406 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 ABHD11Q8NFV4 315 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 CALML6Q8TD86 181 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 ACER1Q8TDN7 264 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 GLT1D1Q96MS3 346 aa15.45■□□□□ 0.06
CIRBP-228ENST00000590347 LAMB1P07942 1786 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 RGSL1A5PLK6 1076 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 SNHG28P0DPA3 235 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 POLR2BP30876 1174 aaKnown RBP15.44■□□□□ 0.06
CIRBP-228ENST00000590347 GABRB2P47870 512 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 GLRBP48167 497 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 GPC3P51654 580 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 NME5P56597 212 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 SESN2P58004 480 aaPredicted RBP15.44■□□□□ 0.06
CIRBP-228ENST00000590347 IRF9Q00978 393 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 DRICH1Q6PGQ1 229 aaPredicted RBP15.44■□□□□ 0.06
CIRBP-228ENST00000590347 PEX5LQ8IYB4 626 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 LGI2Q8N0V4 545 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 ABRAQ8N0Z2 381 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 MAGED4Q96JG8 741 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 CDH7Q9ULB5 785 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 SLC15A5A6NIM6 579 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 ZSCAN5BA6NJL1 495 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 CLOCKO15516 846 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 IL18RAPO95256 599 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 HLA-DRAP01903 254 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 RBL1P28749 1068 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 TYK2P29597 1187 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 ROR1Q01973 937 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 ATAD3BQ5T9A4 648 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 ARCQ7LC44 396 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 TRUB1Q8WWH5 349 aaKnown RBP15.44■□□□□ 0.06
CIRBP-228ENST00000590347 CPB2Q96IY4 423 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 ADI1Q9BV57 179 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 TMEM39BQ9GZU3 492 aa15.44■□□□□ 0.06
CIRBP-228ENST00000590347 APOBEC3GQ9HC16 384 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms