RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FLCNQ8NFG4 579 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 MAIP1Q8WWC4 291 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 HAUS1Q96CS2 278 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 OSBPL6Q9BZF3 934 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 SP110Q9HB58 689 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 DTLQ9NZJ0 730 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 VPS51Q9UID3 782 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 PLA2G4CQ9UP65 541 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 STARD13Q9Y3M8 1113 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 ZSCAN5CA6NGD5 496 aaPredicted RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 PPP1R12AO14974 1030 aaPredicted RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 NPC1O15118 1278 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 SNAP91O60641 907 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 MAP3K6O95382 1288 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 SRPRAP08240 638 aaKnown RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 PRLRP16471 622 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 TIE1P35590 1138 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 GEMIN4P57678 1058 aaKnown RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 MRPS21P82921 87 aaKnown RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 SLC20A2Q08357 652 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 ADCY2Q08462 1091 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 GALNT2Q10471 571 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 SLC10A2Q12908 348 aaPredicted RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 CCINQ13939 588 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 PDK1Q15118 436 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 LONRF2Q1L5Z9 754 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 FNDC3BQ53EP0 1204 aaKnown RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 TRMT11Q7Z4G4 463 aaKnown RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 SLC13A5Q86YT5 568 aaPredicted RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 TP53INP2Q8IXH6 220 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 SYNPOQ8N3V7 929 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 ZNF513Q8N8E2 541 aaPredicted RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 CCNYQ8ND76 341 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 PJA1Q8NG27 643 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 KCNV2Q8TDN2 545 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 CYB5D2Q8WUJ1 264 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 NSMCE1Q8WV22 266 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 SORCS1Q8WY21 1168 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 EZH1Q92800 747 aaPredicted RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 NAP1L3Q99457 506 aaPredicted RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 HERPUD2Q9BSE4 406 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 FOXQ1Q9C009 403 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 LMAN1LQ9HAT1 526 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 IPO11Q9UI26 975 aaKnown RBP13.92□□□□□ -0.18
VMP1-210ENST00000589823 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 ERVW-1Q9UQF0 538 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 SAR1BQ9Y6B6 198 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 MIA3Q5JRA6 1907 aa13.92□□□□□ -0.18
VMP1-210ENST00000589823 CXorf51AA0A1B0GTR3 108 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 TMEM221A6NGB7 291 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 M0R296 226 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 TNFRSF10AO00220 468 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 PRAMEF11O60813 436 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 RNF40O75150 1001 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 ZMPSTE24O75844 475 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 FGGP02679 453 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 CHRNB1P11230 501 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 HNRNPLP14866 589 aaKnown RBP eCLIP13.91□□□□□ -0.187e-9■■■■■ 28.7
VMP1-210ENST00000589823 PECAM1P16284 738 aaPredicted RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 GLDCP23378 1020 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 GARSP41250 739 aaKnown RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 CTSOP43234 321 aaPredicted RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 KIR2DL1P43626 348 aaPredicted RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 OTUD4Q01804 1114 aaKnown RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 IL10RBQ08334 325 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 KLF1Q13351 362 aaPredicted RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 EGFLAMQ63HQ2 1017 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 SDE2Q6IQ49 451 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 TIGD7Q6NT04 549 aaPredicted RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 ADAT2Q7Z6V5 191 aaKnown RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 CCDC33Q8N5R6 958 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 ZNF592Q92610 1267 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 RPL10LQ96L21 214 aaKnown RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 BRD8Q9H0E9 1235 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 RBM12Q9NTZ6 932 aaKnown RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 SAE1Q9UBE0 346 aaPredicted RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 SIT1Q9Y3P8 196 aa13.91□□□□□ -0.18
VMP1-210ENST00000589823 MTF2Q9Y483 593 aaPredicted RBP13.91□□□□□ -0.18
VMP1-210ENST00000589823 TCRBV7S2A1N4TA0A589 114 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 H7C0C1 242 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 J3KR12 359 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
VMP1-210ENST00000589823 MCF2LO15068 1137 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 MAFKO60675 156 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 ATP5OP48047 213 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 STK19P49842 368 aaPredicted RBP13.9□□□□□ -0.18
VMP1-210ENST00000589823 ARF5P84085 180 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 ZNF234Q14588 700 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 NOMO1Q15155 1222 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 HSF5Q4G112 596 aaPredicted RBP13.9□□□□□ -0.18
VMP1-210ENST00000589823 C2orf27AQ580R0 203 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 EMC10Q5UCC4 262 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 LINGO4Q6UY18 593 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 LEKR1Q6ZMV7 388 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 ARHGAP36Q6ZRI8 547 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 METTL3Q86U44 580 aaKnown RBP13.9□□□□□ -0.18
VMP1-210ENST00000589823 CHPFQ8IZ52 775 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 ZNF687Q8N1G0 1237 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 RASGEF1CQ8N431 466 aa13.9□□□□□ -0.18
VMP1-210ENST00000589823 ATP11CQ8NB49 1132 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms