RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 PLA2G2CQ5R387 149 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 SYCP2LQ5T4T6 812 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 FAM72AQ5TYM5 149 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 LYSMD4Q5XG99 296 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 FAM72DQ6L9T8 149 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 USP30Q70CQ3 517 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 RABEPKQ7Z6M1 372 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 FAM72BQ86X60 149 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 NIPA2Q8N8Q9 360 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 RTL3Q8N8U3 475 aaKnown RBP16.82■□□□□ 0.28
DNMT1-221ENST00000589538 FRS2Q8WU20 508 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 CTNNBL1Q8WYA6 563 aaPredicted RBP16.82■□□□□ 0.28
DNMT1-221ENST00000589538 MRFAP1L1Q96HT8 127 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 SPON2Q9BUD6 331 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 NUP85Q9BW27 656 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 ATP13A1Q9HD20 1204 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 WSB2Q9NYS7 404 aaPredicted RBP16.82■□□□□ 0.28
DNMT1-221ENST00000589538 UVRAGQ9P2Y5 699 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 NENFQ9UMX5 172 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 NEU3Q9UQ49 428 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 GVINP1Q7Z2Y8 2422 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 CEP192Q8TEP8 1941 aa16.82■□□□□ 0.28
DNMT1-221ENST00000589538 NYNRINQ9P2P1 1898 aaKnown RBP16.82■□□□□ 0.28
DNMT1-221ENST00000589538 NUP205Q92621 2012 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 A0A0D9SEW6 157 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 CBX4O00257 560 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 ALOX15BO15296 676 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 CREB3O43889 395 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 RAMP2O60895 175 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 LRCH4O75427 683 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 ADH1BP00325 375 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 H2AFZP0C0S5 128 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 SDHBP21912 280 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 TGM1P22735 817 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 MIPP30301 263 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 YBEYP58557 167 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-221ENST00000589538 TPI1P60174 286 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 GFPT1Q06210 699 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-221ENST00000589538 SEMA3BQ13214 749 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 POLD3Q15054 466 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-221ENST00000589538 ASTE1Q2TB18 679 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-221ENST00000589538 BOLA3Q53S33 107 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 IL31Q6EBC2 164 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 H2AFVQ71UI9 128 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 PYROXD2Q8N2H3 581 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 FRMD1Q8N878 549 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 ATP11CQ8NB49 1132 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 CADM4Q8NFZ8 388 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 OR8D1Q8WZ84 308 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 PTPRN2Q92932 1015 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 TOE1Q96GM8 510 aaKnown RBP16.81■□□□□ 0.28
DNMT1-221ENST00000589538 ZNF419Q96HQ0 510 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-221ENST00000589538 ACE2Q9BYF1 805 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-221ENST00000589538 TRIM7Q9C029 511 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 NHEJ1Q9H9Q4 299 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-221ENST00000589538 PARD6AQ9NPB6 346 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 PCSK1NQ9UHG2 260 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 DNAI1Q9UI46 699 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 ANAPC7Q9UJX3 599 aa16.81■□□□□ 0.28
DNMT1-221ENST00000589538 CHD5Q8TDI0 1954 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 ZSCAN5CA6NGD5 496 aaPredicted RBP16.8■□□□□ 0.28
DNMT1-221ENST00000589538 SNAP91O60641 907 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 TMEM253P0C7T8 217 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 ZNF33AQ06730 810 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 CST6Q15828 149 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 FAM46CQ5VWP2 391 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 PRR23CQ6ZRP0 262 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 SYT12Q8IV01 421 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 ARFGAP1Q8N6T3 406 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 C12orf50Q8NA57 414 aaPredicted RBP16.8■□□□□ 0.28
DNMT1-221ENST00000589538 OR7D4Q8NG98 312 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 CEP76Q8TAP6 659 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 ZNF564Q8TBZ8 553 aaPredicted RBP16.8■□□□□ 0.28
DNMT1-221ENST00000589538 PIGKQ92643 395 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 ARHGEF2Q92974 986 aaKnown RBP16.8■□□□□ 0.28
DNMT1-221ENST00000589538 FAM129BQ96TA1 746 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 SNRNP25Q9BV90 132 aaKnown RBP16.8■□□□□ 0.28
DNMT1-221ENST00000589538 CEP44Q9C0F1 390 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 BTBD1Q9H0C5 482 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 PABPC3Q9H361 631 aaKnown RBP16.8■□□□□ 0.28
DNMT1-221ENST00000589538 MTG2Q9H4K7 406 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 DHX35Q9H5Z1 703 aaKnown RBP16.8■□□□□ 0.28
DNMT1-221ENST00000589538 SGK2Q9HBY8 427 aa16.8■□□□□ 0.28
DNMT1-221ENST00000589538 TNRC6BQ9UPQ9 1833 aaKnown RBP16.8■□□□□ 0.28
DNMT1-221ENST00000589538 C1QTNF3-AMACRE9PGA6 284 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 EEF2KO00418 725 aaKnown RBP16.79■□□□□ 0.28
DNMT1-221ENST00000589538 MCF2LO15068 1137 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 SRCP12931 536 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 C5AR1P21730 350 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 HCAR3P49019 387 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 NUMBP49757 651 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 SERPINH1P50454 418 aaKnown RBP16.79■□□□□ 0.28
DNMT1-221ENST00000589538 ZNF75DP51815 510 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 PARP15Q460N3 678 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 WDR45BQ5MNZ6 344 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 CACUL1Q86Y37 369 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 MMAAQ8IVH4 418 aaKnown RBP16.79■□□□□ 0.28
DNMT1-221ENST00000589538 STK40Q8N2I9 435 aa16.79■□□□□ 0.28
DNMT1-221ENST00000589538 PCDH20Q8N6Y1 951 aaKnown RBP16.79■□□□□ 0.28
DNMT1-221ENST00000589538 GANCQ8TET4 914 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms