RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 BAIAP3O94812 1187 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 SUN1O94901 812 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 ABLIM3O94929 683 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 AP2A1O95782 977 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 CCNB1P14635 433 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 RHOQP17081 205 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PGAM1P18669 254 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TACR2P21452 398 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PRKCHP24723 683 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 DNAJB2P25686 324 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 GBP2P32456 591 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 CD68P34810 354 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 CA8P35219 290 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 ATP5C1P36542 298 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 ALDH1A3P47895 512 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PAPOLAP51003 745 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 KPNA1P52294 538 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 CRADDP78560 199 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 OLIG2Q13516 323 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 VEPH1Q14D04 833 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 LRRC14Q15048 493 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TAF12Q16514 161 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 HECTD3Q5T447 861 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 STEAP4Q687X5 459 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 NUGGCQ68CJ6 796 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TPGS2Q68CL5 300 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TIGD7Q6NT04 549 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 OTOP3Q7RTS5 596 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 OTOP2Q7RTS6 562 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TFAP2DQ7Z6R9 452 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 DDX53Q86TM3 631 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PRPF39Q86UA1 669 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 CIR1Q86X95 450 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 C7orf61Q8IZ16 206 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 C4orf33Q8N1A6 199 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PPM1NQ8N819 430 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 OR52K1Q8NGK4 314 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 GDAP1Q8TB36 358 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 SLC44A1Q8WWI5 657 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 AUTS2Q8WXX7 1259 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TEKT5Q96M29 485 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 CCT8L2Q96SF2 557 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TRIM56Q9BRZ2 755 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 KIF9Q9HAQ2 790 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PLAC1Q9HBJ0 212 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 IL23AQ9NPF7 189 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 NDFIP2Q9NV92 336 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 SYBUQ9NX95 663 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 FNIP2Q9P278 1114 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PPARGC1AQ9UBK2 798 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 DNMT3LQ9UJW3 386 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 SMG5Q9UPR3 1016 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 HBS1LQ9Y450 684 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 DOCK6Q96HP0 2047 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 IGLV3-10A0A075B6K4 115 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 GOLGA6L7A0A1B0GV03 622 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 CARNS1A5YM72 827 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF840PA6NDX5 716 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 FAM47DPA6NHR8 397 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 FAM159BA6NKW6 160 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 ERI2A8K979 691 aaKnown RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 CXorf49A8MYA2 514 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 F5H5T6 163 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 MATN3O15232 486 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 PRPF4O43172 522 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 MAFKO60675 156 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 USP12O75317 370 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 FAM155BO75949 473 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 NEBLO76041 1014 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 GJB5O95377 273 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 FAM107AO95990 144 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 MT-ND3P03897 115 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 HLA-DQB2P05538 268 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 CSH1P0DML2 217 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 CSH2P0DML3 217 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 HMGA1P17096 107 aaKnown RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 SYN1P17600 705 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 DRD4P21917 467 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 ELF1P32519 619 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 PPM1AP35813 382 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 KCNQ1P51787 676 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 NDST2P52849 883 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 HNRNPH2P55795 449 aaKnown RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 RING1Q06587 406 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 TWF1Q12792 350 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 MTA1Q13330 715 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 MPP2Q14168 576 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 ANO4Q32M45 955 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 ALFQ53S48 1182 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 ACBD5Q5T8D3 534 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 TTC39BQ5VTQ0 682 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 KCTD11Q693B1 232 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 NADSYN1Q6IA69 706 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 FBXL22Q6P050 247 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 TRMT10BQ6PF06 316 aaKnown RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 SLC26A11Q86WA9 606 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 RASSF3Q86WH2 238 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms