RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 RUBCNQ92622 972 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 OTUB2Q96DC9 234 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 SNF8Q96H20 258 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ZFYVE19Q96K21 471 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 SPATA13Q96N96 652 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 NECTIN4Q96NY8 510 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 KXD1Q9BQD3 176 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 MAGEH1Q9H213 219 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 UBE2ZQ9H832 354 aaPredicted RBP11.56□□□□□ -0.56
VMP1-207ENST00000588131 SP110Q9HB58 689 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 ZFP14Q9HCL3 533 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 FAM114A2Q9NRY5 505 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 DUS2Q9NX74 493 aaKnown RBP11.56□□□□□ -0.56
VMP1-207ENST00000588131 OBP2AQ9NY56 170 aa11.56□□□□□ -0.56
VMP1-207ENST00000588131 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 F5H423 210 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 DNALI1O14645 258 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 SLC9A3R1O14745 358 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 MATN3O15232 486 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 TP73O15350 636 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 PRAMEF11O60813 436 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 SEC31AO94979 1220 aaKnown RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 METTL18O95568 372 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 JCHAINP01591 159 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 CYP17A1P05093 508 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 FOSL2P15408 326 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 GLDCP23378 1020 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 SP100P23497 879 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 DRG2P55039 364 aaKnown RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 IFI35P80217 286 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 IL10RBQ08334 325 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 LMAN2Q12907 356 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 GRM2Q14416 872 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 DHCR24Q15392 516 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 ANO4Q32M45 955 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ANKRD20A2Q5SQ80 823 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ANKRD20A1Q5TYW2 823 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ANKRD20A3Q5VUR7 823 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 IZUMO3Q5VZ72 239 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 IL31Q6EBC2 164 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 TIGD7Q6NT04 549 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 LRRC49Q8IUZ0 686 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 CCHCR1Q8TD31 782 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 PPM1EQ8WY54 764 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 MAML1Q92585 1016 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 FGF14Q92915 247 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ALG14Q96F25 216 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ZNF419Q96HQ0 510 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 LMLNQ96KR4 655 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 SPON2Q9BUD6 331 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 RPP25Q9BUL9 199 aaKnown RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 BBS2Q9BXC9 721 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ACE2Q9BYF1 805 aaPredicted RBP11.55□□□□□ -0.56
VMP1-207ENST00000588131 MUC3BQ9H195 1237 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 PDFQ9HBH1 243 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ATP13A1Q9HD20 1204 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ZDHHC18Q9NUE0 388 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 MARK1Q9P0L2 795 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 WHRNQ9P202 907 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 PAK5Q9P286 719 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 NFU1Q9UMS0 254 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 OR51B4Q9Y5P0 310 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 ACTL7AQ9Y615 435 aa11.55□□□□□ -0.56
VMP1-207ENST00000588131 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.54□□□□□ -0.56
VMP1-207ENST00000588131 TCRBV7S3A2A0A539 114 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 ZBTB24O43167 697 aaPredicted RBP11.54□□□□□ -0.56
VMP1-207ENST00000588131 MTSS1O43312 755 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 MBTPS2O43462 519 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 KDELR3O43731 214 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 SNAP91O60641 907 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 STK10O94804 968 aaKnown RBP11.54□□□□□ -0.56
VMP1-207ENST00000588131 CCNB1P14635 433 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 TYRP14679 529 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 CD70P32970 193 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 CD68P34810 354 aaPredicted RBP11.54□□□□□ -0.56
VMP1-207ENST00000588131 ITGA8P53708 1063 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 OXCT1P55809 520 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 ARF5P84085 180 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 SLC10A7Q0GE19 358 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 FCHO2Q0JRZ9 810 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 SMAD4Q13485 552 aaKnown RBP11.54□□□□□ -0.56
VMP1-207ENST00000588131 CUL1Q13616 776 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 HLTFQ14527 1009 aaKnown RBP eCLIP11.54□□□□□ -0.56
VMP1-207ENST00000588131 TEX44Q53QW1 395 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 HABP4Q5JVS0 413 aaKnown RBP11.54□□□□□ -0.56
VMP1-207ENST00000588131 ANKRD22Q5VYY1 191 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 GPR153Q6NV75 609 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 ZNF783Q6ZMS7 281 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 ARHGEF18Q6ZSZ5 1173 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 MFSD6LQ8IWD5 586 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 DEFB123Q8N688 67 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 CNTD1Q8N815 330 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 FIBINQ8TAL6 211 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 CPT1BQ92523 772 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 ART4Q93070 314 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 FATE1Q969F0 183 aa11.54□□□□□ -0.56
VMP1-207ENST00000588131 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms