RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 LMNB2Q03252 620 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 XRCC4Q13426 336 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 BYSLQ13895 437 aaKnown RBP17.31■□□□□ 0.36
HMG20B-215ENST00000585741 TIGD7Q6NT04 549 aaPredicted RBP17.31■□□□□ 0.36
HMG20B-215ENST00000585741 GSTA5Q7RTV2 222 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 KLHL7Q8IXQ5 586 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC105Q8IYK2 499 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 NPWQ8N729 165 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 ATG4AQ8WYN0 398 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 HMCESQ96FZ2 354 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 ABCB8Q9NUT2 735 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 SEPT10Q9P0V9 454 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 GGA2Q9UJY4 613 aa17.31■□□□□ 0.36
HMG20B-215ENST00000585741 KRBA1A5PL33 1030 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 PDE2AO00408 941 aaPredicted RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 CACNG3O60359 315 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 PABPC1P11940 636 aaKnown RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 CHRNA3P32297 505 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 ACTN2P35609 894 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 LMAN2Q12907 356 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 DMC1Q14565 340 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 HEATR6Q6AI08 1181 aaKnown RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 CXorf57Q6NSI4 855 aaKnown RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC70Q6NSX1 233 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 SIX5Q8N196 739 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 NETO2Q8NC67 525 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 SPATA4Q8NEY3 305 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 OR7D4Q8NG98 312 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 GRK7Q8WTQ7 553 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 DNASE1L2Q92874 299 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 ARHGEF2Q92974 986 aaKnown RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 C2orf49Q9BVC5 232 aaPredicted RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 CARD6Q9BX69 1037 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 C8orf33Q9H7E9 229 aaPredicted RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 HAUS2Q9NVX0 235 aa17.3■□□□□ 0.36
HMG20B-215ENST00000585741 R3HDM2Q9Y2K5 976 aaKnown RBP17.3■□□□□ 0.36
HMG20B-215ENST00000585741 CFAP69A5D8W1 941 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 SGK1O00141 431 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 CBX4O00257 560 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 LIASO43766 372 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 POLR2EP19388 210 aaKnown RBP17.29■□□□□ 0.36
HMG20B-215ENST00000585741 GJA4P35212 333 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 C2orf54Q08AI8 447 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 GALNT2Q10471 571 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 SLC10A2Q12908 348 aaPredicted RBP17.29■□□□□ 0.36
HMG20B-215ENST00000585741 SLC45A4Q5BKX6 768 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 FSCBQ5H9T9 825 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC137Q6PK04 289 aaKnown RBP17.29■□□□□ 0.36
HMG20B-215ENST00000585741 ARHGAP12Q8IWW6 846 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC13Q8IYE1 715 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 AHI1Q8N157 1196 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 BBS5Q8N3I7 341 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 PRELID2Q8N945 189 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 DTWD2Q8NBA8 298 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC26Q8TAB7 109 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 WFDC5Q8TCV5 224 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 WFIKKN2Q8TEU8 576 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 FEM1AQ9BSK4 669 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 LRRC19Q9H756 370 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 WNT16Q9UBV4 365 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 ZNF212Q9UDV6 495 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 IPO11Q9UI26 975 aaKnown RBP17.29■□□□□ 0.36
HMG20B-215ENST00000585741 DNPEPQ9ULA0 475 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 ZNF292O60281 2723 aa17.29■□□□□ 0.36
HMG20B-215ENST00000585741 A0A0D9SEW6 157 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 ZSCAN5CA6NGD5 496 aaPredicted RBP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 MTSS1O43312 755 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 TULP3O75386 442 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 GAS8O95995 478 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 SRFP11831 508 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 CCNCP24863 283 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 MZF1P28698 734 aaPredicted RBP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 CD70P32970 193 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 ACVRL1P37023 503 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 COILP38432 576 aaPredicted RBP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 EIF2DP41214 584 aaKnown RBP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 FNTAP49354 379 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 NUMBP49757 651 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 GEMIN4P57678 1058 aaKnown RBP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 KDSRQ06136 332 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 SULT2A1Q06520 285 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 SERINC3Q13530 473 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 ANGPT1Q15389 498 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 SIX1Q15475 284 aaPredicted RBP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 PLEKHG6Q3KR16 790 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 ARTNQ5T4W7 220 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 AFMIDQ63HM1 303 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 RETSATQ6NUM9 610 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 C12orf50Q8NA57 414 aaPredicted RBP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 ATL2Q8NHH9 583 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 UCMAQ8WVF2 138 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 NKD2Q969F2 451 aaPredicted RBP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 HDAC11Q96DB2 347 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 OLFM3Q96PB7 478 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 QKIQ96PU8 341 aaKnown RBP eCLIP17.28■□□□□ 0.36
HMG20B-215ENST00000585741 PNKPQ96T60 521 aa17.28■□□□□ 0.36
HMG20B-215ENST00000585741 KRT12Q99456 494 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms