RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PABPC1LQ4VXU2 614 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ANKRD40Q6AI12 368 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 LVRNQ6Q4G3 990 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RRM2BQ7LG56 351 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 UBE3BQ7Z3V4 1068 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 LRRTM4Q86VH4 590 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 IQCA1Q86XH1 822 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 LDLRAD3Q86YD5 345 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GPR135Q8IZ08 494 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CPEB3Q8NE35 698 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PRSS33Q8NF86 280 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 OR52N2Q8NGI0 321 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CD99L2Q8TCZ2 262 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ACTRT2Q8TDY3 377 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 WASF1Q92558 559 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ATP2A3Q93084 1043 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 NKD2Q969F2 451 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TMEM120AQ9BXJ8 343 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 STK33Q9BYT3 514 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GPR63Q9BZJ6 419 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ALDH8A1Q9H2A2 487 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 UPF2Q9HAU5 1272 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 UBN1Q9NPG3 1134 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PFDN4Q9NQP4 134 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CEP72Q9P209 647 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CPSF2Q9P2I0 782 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 KCNE5Q9UJ90 142 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MID2Q9UJV3 735 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RPS6KA6Q9UK32 745 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 USP22Q9UPT9 525 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CDYLQ9Y232 598 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MAGED1Q9Y5V3 778 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GBF1Q92538 1859 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 DOCK1Q14185 1865 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 GTPBP1O00178 669 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TAF4O00268 1085 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 DHX16O60231 1041 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 FRAT2O75474 233 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CABYRO75952 493 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TBX18O95935 607 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CD4P01730 458 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ALADP13716 330 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 HK1P19367 917 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ACVR2AP27037 513 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CTNNA1P35221 906 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ADD2P35612 726 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 NBL1P41271 181 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 NPTX2P47972 431 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 UCP3P55916 312 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 NHLH2Q02577 135 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ITIH3Q06033 890 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SCAPQ12770 1279 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RESTQ13127 1097 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MAMLD1Q13495 774 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TDGQ13569 410 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ARHGEF7Q14155 803 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 WTAPQ15007 396 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RAB30Q15771 203 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 SLC35G1Q2M3R5 365 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ARHGAP15Q53QZ3 475 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ODF2Q5BJF6 829 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 FAM69AQ5T7M9 428 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 CRTC1Q6UUV9 634 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 Q8N1X5 172 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 BOLLQ8N9W6 283 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 B3GALNT2Q8NCR0 500 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 FAM71BQ8TC56 605 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 KBTBD7Q8WVZ9 684 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ANKS1AQ92625 1134 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MOAP1Q96BY2 351 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 REXO5Q96IC2 774 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 WWC2-AS2Q96NR7 200 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 USP44Q9H0E7 712 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 BLOC1S4Q9NUP1 217 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ADD3Q9UEY8 706 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 RASAL2Q9UJF2 1139 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 VPS28Q9UK41 221 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 ZDHHC8Q9ULC8 765 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 TBX20Q9UMR3 447 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 Q9Y3F1 56 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 MYH7P12883 1935 aa2.06□□□□□ -2.08
SMCHD1-211ENST00000584897 PCNTO95613 3336 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 LOC285556D6RIA3 1793 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TCRBV7S2A1N4TA0A589 114 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 MBD3L4A6NDZ8 208 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 MBD3L3A6NE82 208 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 AQP7P3A6NL99 342 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ATP2A1O14983 1001 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TSPAN3O60637 253 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 SRGAP2O75044 1071 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 PPP6R2O75170 966 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 GUCY1B2O75343 617 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 HAUS5O94927 633 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 CCL5P13501 91 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 TSHRP16473 764 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ITGALP20701 1170 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 RPS6KB1P23443 525 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 MAPK4P31152 587 aa2.05□□□□□ -2.08
SMCHD1-211ENST00000584897 ATICP31939 592 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms