RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	FRS2	Q8WU20	508 aa		13.67	□□□□□ -0.22
SREBF1-223	ENST00000584760	FAM172A	Q8WUF8	416 aa		13.67	□□□□□ -0.22
SREBF1-223	ENST00000584760	PSMB7	Q99436	277 aa		13.67	□□□□□ -0.22
SREBF1-223	ENST00000584760	GPR174	Q9BXC1	333 aa		13.67	□□□□□ -0.22
SREBF1-223	ENST00000584760	HAUS4	Q9H6D7	363 aa		13.67	□□□□□ -0.22
SREBF1-223	ENST00000584760	NEU3	Q9UQ49	428 aa		13.67	□□□□□ -0.22
SREBF1-223	ENST00000584760	ASCC3	Q8N3C0	2202 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	FAM221B	A6H8Z2	402 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	GOLGA6L19	H0YKK7	550 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	DNTT	P04053	509 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	RHOC	P08134	193 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	CD59	P13987	128 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	VAV1	P15498	845 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	TNFAIP3	P21580	790 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	ADRA1B	P35368	520 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	UBASH3A	P57075	661 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	RPL7A	P62424	266 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	TTC31	Q49AM3	519 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	PPP1R2P3	Q6NXS1	205 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	LRRC31	Q6UY01	552 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	CCDC185	Q8N715	623 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	CADM4	Q8NFZ8	388 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	PTPRN2	Q92932	1015 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	FOXJ1	Q92949	421 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	NTAN1	Q96AB6	310 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	VCPIP1	Q96JH7	1222 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	CAMK1G	Q96NX5	476 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	MCEE	Q96PE7	176 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	PPP1R9B	Q96SB3	815 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	NUP58	Q9BVL2	599 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	MUC3B	Q9H195	1237 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	PABPC3	Q9H361	631 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	CAPN10	Q9HC96	672 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	MPP6	Q9NZW5	540 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	VPS28	Q9UK41	221 aa		13.66	□□□□□ -0.22
SREBF1-223	ENST00000584760	FASN	P49327	2511 aa	Known RBP	13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760		A0A1W2PQJ5	194 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	DDX3X	O00571	662 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ARHGAP33	O14559	1287 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	CCP110	O43303	1012 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ATP9B	O43861	1147 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	SRGAP2	O75044	1071 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	CAPNS1	P04632	268 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ACSL1	P33121	698 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ZNF143	P52747	638 aa	Predicted RBP	13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	OGDH	Q02218	1023 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	SCAP	Q12770	1279 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ELAVL3	Q14576	367 aa	Known RBP	13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	CST6	Q15828	149 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ZNF423	Q2M1K9	1284 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ARL13B	Q3SXY8	428 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	C6orf118	Q5T5N4	469 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	FAM124A	Q86V42	546 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	DCAF4L2	Q8NA75	395 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	DNASE2B	Q8WZ79	361 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	FAM129B	Q96TA1	746 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ZYG11B	Q9C0D3	744 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	OSBPL2	Q9H1P3	480 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	PCED1A	Q9H1Q7	454 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	OR12D3	Q9UGF7	316 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	SERGEF	Q9UGK8	458 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	VPS51	Q9UID3	782 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	SLC25A13	Q9UJS0	675 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	SCML1	Q9UN30	329 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	HS3ST2	Q9Y278	367 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	GPSM3	Q9Y4H4	160 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	TMEM131	Q92545	1883 aa		13.65	□□□□□ -0.22
SREBF1-223	ENST00000584760	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760		A0A0D9SEW6	157 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	METTL12	A8MUP2	240 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	MEI4	A8MW99	385 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	TMCO5B	A8MYB1	307 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	FAM72C	H0Y354	149 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	MID1	O15344	667 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	ATMIN	O43313	823 aa	Predicted RBP	13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	SH3BP5	O60239	455 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	SNAP91	O60641	907 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	GZMA	P12544	262 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	OR1E1	P30953	314 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	NNMT	P40261	264 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	KLHL30	Q0D2K2	578 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	MAMLD1	Q13495	774 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	TRIP6	Q15654	476 aa	Known RBP	13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	SYCP2L	Q5T4T6	812 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	FAM72A	Q5TYM5	149 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	HGSNAT	Q68CP4	663 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	PLEKHA7	Q6IQ23	1121 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	FAM72D	Q6L9T8	149 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	ZNF783	Q6ZMS7	281 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	USP30	Q70CQ3	517 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	RABEPK	Q7Z6M1	372 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	NLRP14	Q86W24	1093 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	FAM72B	Q86X60	149 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	DNAAF5	Q86Y56	855 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	MMAA	Q8IVH4	418 aa	Known RBP	13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	STK40	Q8N2I9	435 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	SH2D3C	Q8N5H7	860 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	PNPLA1	Q8N8W4	532 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms