RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 DAB1O75553 588 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 SKAP2O75563 359 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 KRT37O76014 449 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 HOXD8P13378 290 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 EN2P19622 333 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 SLC12A2P55011 1212 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 DRG2P55039 364 aaKnown RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 COPS2P61201 443 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 USP4Q13107 963 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 THOC5Q13769 683 aaKnown RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 IKBKEQ14164 716 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 DPYSL2Q16555 572 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 SPATA21Q7Z572 469 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 TRABD2AQ86V40 505 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 SLC41A1Q8IVJ1 513 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 CNTD1Q8N815 330 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 FNIP1Q8TF40 1166 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 DPF3Q92784 378 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ZNF670Q9BS34 389 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 VRTNQ9H8Y1 702 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 MGAMO43451 1857 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 LAMA1P25391 3075 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 MEI4A8MW99 385 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 GABRDO14764 452 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 SEC24AO95486 1093 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ATP5DP30049 168 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 LRPAP1P30533 357 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ABL2P42684 1182 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 PRAMEP78395 509 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 N4BP2L1Q5TBK1 243 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 AGBL2Q5U5Z8 902 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 HS6ST3Q8IZP7 471 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 NSMCE1Q8WV22 266 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 KLHL29Q96CT2 875 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ELMO2Q96JJ3 720 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 OXCT2Q9BYC2 517 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 TASP1Q9H6P5 420 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 UXTQ9UBK9 157 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 MTMR11A4FU01 709 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 CCDC85CA6NKD9 419 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 SDR42E2A6NKP2 422 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 NUDT17P0C025 328 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 DRD4P21917 467 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 GABRR2P28476 465 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 GCAP28676 217 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 KCNJ2P63252 427 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 NAA25Q14CX7 972 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 POLD3Q15054 466 aaPredicted RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 CFAP157Q5JU67 520 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 PIK3R6Q5UE93 754 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 PDZD4Q76G19 769 aaPredicted RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 COLGALT2Q8IYK4 626 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 C7orf61Q8IZ16 206 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 TMEM86AQ8N2M4 240 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 NIPA2Q8N8Q9 360 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 SF3B1O75533 1304 aaKnown RBP eCLIP10.48□□□□□ -0.735e-6■■■■■ 88.1
RFFL-212ENST00000584655 PLXNB2O15031 1838 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 IQANK1A0A1B0GTG1 560 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 ENO1P06733 434 aaKnown RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 SGSHP51688 502 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 MGAT3Q09327 533 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 CSHL1Q14406 222 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 SCIMPQ6UWF3 145 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 TTC39CQ8N584 583 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 SORCS1Q8WY21 1168 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 IFT43Q96FT9 208 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 SUSD3Q96L08 255 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 NSRP1Q9H0G5 558 aaKnown RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 VPS28Q9UK41 221 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 MTO1Q9Y2Z2 717 aaKnown RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 FCF1Q9Y324 198 aaKnown RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 ATP6AP2A0A1C7CYW4 349 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 ATP6AP2O75787 350 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 PMLP29590 882 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 RPL9P32969 192 aaKnown RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 CORO7P57737 925 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 CAV1Q03135 178 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 ZNF789Q5FWF6 425 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 CD300LGQ6UXG3 332 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 TAS2R42Q7RTR8 314 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 ALYREFQ86V81 257 aaKnown RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 LPCAT1Q8NF37 534 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 GRIN3AQ8TCU5 1115 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 DTX3LQ8TDB6 740 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 ZNF419Q96HQ0 510 aaPredicted RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 SLC45A3Q96JT2 553 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 ZFYVE19Q96K21 471 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 RNF38Q9H0F5 515 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 DRG1Q9Y295 367 aaKnown RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 DERAQ9Y315 318 aa10.48□□□□□ -0.73
RFFL-212ENST00000584655 ZFP37Q9Y6Q3 630 aaPredicted RBP10.48□□□□□ -0.73
RFFL-212ENST00000584655 GVINP1Q7Z2Y8 2422 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 AGRPO00253 132 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 CFLARO15519 480 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 RAMP2O60895 175 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 MMP13P45452 471 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 PPP1R2P3Q6NXS1 205 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 TTC30BQ8N4P2 665 aa10.47□□□□□ -0.73
RFFL-212ENST00000584655 CCHCR1Q8TD31 782 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms