RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 DLDP09622 509 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ELNP15502 786 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PROZP22891 400 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GRK2P25098 689 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PTPN11Q06124 597 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 BST1Q10588 318 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 HSF5Q4G112 596 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CYP4V2Q6ZWL3 525 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TDRPQ86YL5 185 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 HACE1Q8IYU2 909 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 BCL7CQ8WUZ0 217 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PTCD3Q96EY7 689 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 OXNAD1Q96HP4 312 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 DCLRE1BQ9H816 532 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PRMT7Q9NVM4 692 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NME7Q9Y5B8 376 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SIP14410 1827 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MYADML2A6NDP7 307 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SIGLEC16A6NMB1 481 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 LSM8O95777 96 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZNF865P0CJ78 1059 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 AQP5P55064 265 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TPD52P55327 224 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 KLC1Q07866 573 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SREBF2Q12772 1141 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CUL3Q13618 768 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TUBA3CQ13748 450 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 OR6B2Q6IFH4 312 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FAM183BPQ6ZVS7 135 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 DNAJB7Q7Z6W7 309 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 C7orf31Q8N865 590 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 RBM15BQ8NDT2 890 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CLEC4CQ8WTT0 213 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 HERVK_113Q902F9 699 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ATXN7L3BQ96GX2 97 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZNF333Q96JL9 665 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PPP1R36Q96LQ0 422 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FRMD6Q96NE9 622 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TRPV6Q9H1D0 765 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CYP4F11Q9HBI6 524 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 XAB2Q9HCS7 855 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PNMA8BQ9ULN7 279 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PCDHGC3Q9UN70 934 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 DRG1Q9Y295 367 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MFHAS1Q9Y4C4 1052 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PCDHGB7Q9Y5F8 929 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SLC12A8A0AV02 714 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 AP3B1O00203 1094 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MCF2LO15068 1137 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TRPA1O75762 1119 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PSMG1O95456 288 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PGRP06401 933 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CTSHP09668 335 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 RBL1P28749 1068 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NDST1P52848 882 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CDK16Q00536 496 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PFKPQ01813 784 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 HIC1Q14526 733 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MFSD10Q14728 455 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 LRRC74BQ6ZQY2 392 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 C1orf122Q6ZSJ8 110 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 RXFP2Q8WXD0 754 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TSC22D3Q99576 134 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ADPGKQ9BRR6 497 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GALNT8Q9NY28 637 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 KLK14Q9P0G3 267 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PRR5-ARHGAP8B1AHC4 643 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MTSS1O43312 755 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SNX4O95219 450 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TGDSO95455 350 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TRUB2O95900 331 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SP100P23497 879 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 AKAP5P24588 427 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CDH5P33151 784 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ABCG1P45844 678 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 EPHB1P54762 984 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 YWHAEP62258 255 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ARHGAP8P85298 464 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SLC25A3Q00325 362 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ENPEPQ07075 957 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CACNB2Q08289 660 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FSCN1Q16658 493 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SLC10A6Q3KNW5 377 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FAM209AQ5JX71 171 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NXNQ6DKJ4 435 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SLC22A8Q8TCC7 542 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 REPIN1Q9BWE0 567 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MIS12Q9H081 205 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SENP1Q9P0U3 644 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZNF624Q9P2J8 865 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZNF69Q9UC07 566 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ITGB1BP2Q9UKP3 347 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 LOC100653049A0A140TA62 436 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ARHGAP42A6NI28 874 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FAM155AB1AL88 458 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 KRT34O76011 436 aa11.84□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PDE5AO76074 875 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms