RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 CHRNB2P17787 502 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 CD38P28907 300 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 SCNN1AP37088 669 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 CDH4P55283 916 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 SCAPQ12770 1279 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.02■□□□□ 0.96
SHMT1-209ENST00000582653 FAM131CQ96AQ9 280 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 CFAP57Q96MR6 1250 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 GBP4Q96PP9 640 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 KDM4CQ9H3R0 1056 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 SLC25A13Q9UJS0 675 aa21.02■□□□□ 0.96
SHMT1-209ENST00000582653 RALYQ9UKM9 306 aaKnown RBP21.02■□□□□ 0.96
SHMT1-209ENST00000582653 TBC1D3DA0A087WVF3 549 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3IA0A087WXS9 549 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3EA0A087X179 549 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3KA0A087X1G2 549 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3FA6NER0 549 aaPredicted RBP21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3LB9A6J9 549 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 F9P00740 461 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 WNT1P04628 370 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3HP0C7X1 549 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 DRD3P35462 400 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 ADPRHP54922 357 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 DLG2Q15700 870 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 FAM46CQ5VWP2 391 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3GQ6DHY5 549 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3CQ6IPX1 549 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 SASS6Q6UVJ0 657 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 PROSER1Q86XN7 944 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TBC1D3Q8IZP1 549 aaPredicted RBP21.01■□□□□ 0.95
SHMT1-209ENST00000582653 EMC1Q8N766 993 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 ELF4Q99607 663 aaPredicted RBP21.01■□□□□ 0.95
SHMT1-209ENST00000582653 MUC3BQ9H195 1237 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 TMEM51Q9NW97 253 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 MPP6Q9NZW5 540 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 SARDHQ9UL12 918 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 KNL1Q8NG31 2342 aa21.01■□□□□ 0.95
SHMT1-209ENST00000582653 A0A1W2PR77 199 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 DRGXA6NNA5 263 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 WNT9AO14904 365 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 MCF2LO15068 1137 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 BNIP3LO60238 219 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 SNAP91O60641 907 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 MT-CO1P00395 513 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 TPM2P07951 284 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 SOX5P35711 763 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 COPB1P53618 953 aaKnown RBP21■□□□□ 0.95
SHMT1-209ENST00000582653 JAM2P57087 298 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 FMO1Q01740 532 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 CDR2Q01850 454 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 POM121L1PQ3SYA9 428 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 RAB6CQ53S08 254 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 PRAMEF14Q5SWL7 426 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 FKBP15Q5T1M5 1219 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 ARTNQ5T4W7 220 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 Q6ZVU0 165 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 TFAP2DQ7Z6R9 452 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 DSG4Q86SJ6 1040 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 SLC30A5Q8TAD4 765 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 OR8D1Q8WZ84 308 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 PSMB7Q99436 277 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 RAB6CQ9H0N0 254 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 AASDHPPTQ9NRN7 309 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 METTL5Q9NRN9 209 aaKnown RBP21■□□□□ 0.95
SHMT1-209ENST00000582653 ARHGAP20Q9P2F6 1191 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 PPM1HQ9ULR3 514 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 SIK3Q9Y2K2 1263 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 IGF2RP11717 2491 aa21■□□□□ 0.95
SHMT1-209ENST00000582653 SLC7A4O43246 635 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 LATO43561 262 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 SRGAP2O75044 1071 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 CYP1A1P04798 512 aaPredicted RBP20.99■□□□□ 0.95
SHMT1-209ENST00000582653 RHOCP08134 193 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 ATP11AP98196 1134 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 SYCP1Q15431 976 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 BNIPLQ7Z465 357 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 PRPF39Q86UA1 669 aaKnown RBP20.99■□□□□ 0.95
SHMT1-209ENST00000582653 FAM131BQ86XD5 332 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 ZNF677Q86XU0 584 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 SH2D3CQ8N5H7 860 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 MSANTD4Q8NCY6 345 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 SERAC1Q96JX3 654 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 C1orf74Q96LT6 269 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 PAXBP1Q9Y5B6 917 aa20.99■□□□□ 0.95
SHMT1-209ENST00000582653 TMEM131Q92545 1883 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 CABIN1Q9Y6J0 2220 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 LAMA5O15230 3695 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 PLXNB3Q9ULL4 1909 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 A0A0D9SEW6 157 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 GOLGA8CPA6NN73 597 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 E9PAM4 449 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 K7ERQ8 282 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 TLR4O00206 839 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 ALOX15BO15296 676 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 RTN2O75298 545 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 SRCP12931 536 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 IL9RQ01113 521 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 INAVAQ3KP66 663 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 SLC45A4Q5BKX6 768 aa20.98■□□□□ 0.95
SHMT1-209ENST00000582653 ACBD5Q5T8D3 534 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms