RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	KAZALD1	Q96I82	304 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	HIC2	Q96JB3	615 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	NAP1L4	Q99733	375 aa	Known RBP	3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	FAM118B	Q9BPY3	351 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	SYT17	Q9BSW7	474 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	PCDHAC1	Q9H158	963 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	USP29	Q9HBJ7	922 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	OBP2B	Q9NPH6	170 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	NRIP3	Q9NQ35	241 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	NECTIN3	Q9NQS3	549 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	C9orf78	Q9NZ63	289 aa	Predicted RBP	3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	RGL1	Q9NZL6	768 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	IGSF9	Q9P2J2	1179 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	TRMT112	Q9UI30	125 aa	Known RBP	3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	FZD4	Q9ULV1	537 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	MAFF	Q9ULX9	164 aa		3.57	□□□□□ -1.84
MSI2-215	ENST00000582453	MYH14	Q7Z406	1995 aa	Known RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	ABCC12	Q96J65	1359 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	CYP2D7	A0A087X1C5	515 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	AQP12B	A6NM10	295 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	HMGB1P1	B2RPK0	211 aa	Predicted RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453		H0YIN7	160 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	CLIC1	O00299	241 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	ZSCAN9	O15535	394 aa	Predicted RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	CA12	O43570	354 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	BCAR3	O75815	825 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	BBOX1	O75936	387 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	VIP	P01282	170 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	ITGA5	P08648	1049 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	DHRS4L1	P0CG22	281 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	TMIGD3	P0DMS9	266 aa	Predicted RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	GPT	P24298	496 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	ALDH1B1	P30837	517 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	PBX1	P40424	430 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	NSUN2	Q08J23	767 aa	Known RBP eCLIP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	ATP1A4	Q13733	1029 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	PTK2B	Q14289	1009 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	ZNF268	Q14587	947 aa	Predicted RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	RAB30	Q15771	203 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	MAPKAPK3	Q16644	382 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	CCDC152	Q4G0S7	254 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	RAP1GAP2	Q684P5	730 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	JMJD6	Q6NYC1	403 aa	Predicted RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	MIS18BP1	Q6P0N0	1132 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	FBXO38	Q6PIJ6	1188 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	CYP26C1	Q6V0L0	522 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	RANBP10	Q6VN20	620 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	C1QL2	Q7Z5L3	287 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	SUGP1	Q8IWZ8	645 aa	Known RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	CLASRP	Q8N2M8	674 aa	Known RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	FAM71B	Q8TC56	605 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	OVCA2	Q8WZ82	227 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	GRAMD1A	Q96CP6	724 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	MASTL	Q96GX5	879 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	TBATA	Q96M53	351 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	NUDT22	Q9BRQ3	303 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	EFHD1	Q9BUP0	239 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	C1QTNF7	Q9BXJ2	289 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	PRSS22	Q9GZN4	317 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	3.56	□□□□□ -1.84	6e-8	■■■■□ 20.6
MSI2-215	ENST00000582453	USP44	Q9H0E7	712 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	VPS33B	Q9H267	617 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	VPS45	Q9NRW7	570 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	SEMA5B	Q9P283	1151 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	PDP2	Q9P2J9	529 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	ZNF70	Q9UC06	446 aa	Predicted RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	CA14	Q9ULX7	337 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	DDX19B	Q9UMR2	479 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	MAGED2	Q9UNF1	606 aa	Predicted RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	SCAF8	Q9UPN6	1271 aa	Known RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	BTBD3	Q9Y2F9	522 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	CEP83	Q9Y592	693 aa		3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	LRRFIP2	Q9Y608	721 aa	Known RBP	3.56	□□□□□ -1.84
MSI2-215	ENST00000582453	SNED1	Q8TER0	1413 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	KAT6B	Q8WYB5	2073 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453		A0A1B0GVC2	190 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	SMIM35	A0A1B0GVV1	85 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	IPO5	O00410	1097 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	PODXL	O00592	558 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	TCERG1	O14776	1098 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	DSCR3	O14972	297 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	NCAM2	O15394	837 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	PRAMEF2	O60811	474 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	UBTFL1	P0CB47	393 aa	Predicted RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	PECAM1	P16284	738 aa	Predicted RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	DRD1	P21728	446 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	YY1	P25490	414 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	JAK3	P52333	1124 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	RRP1	P56182	461 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	GRAP	Q13588	217 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	SIM2	Q14190	667 aa	Predicted RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	MVP	Q14764	893 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	DAZAP2	Q15038	168 aa	Predicted RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	POSTN	Q15063	836 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	SUPT20HL1	Q3ZLR7	823 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	FAM90A2P	Q658T7	463 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	ARL6IP4	Q66PJ3	421 aa	Known RBP	3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	ZNF626	Q68DY1	528 aa		3.55	□□□□□ -1.84
MSI2-215	ENST00000582453	CCDC70	Q6NSX1	233 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms