RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 VPS28Q9UK41 221 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 ACTL7AQ9Y615 435 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 PIAS3Q9Y6X2 628 aa9.75□□□□□ -0.85
RFFL-210ENST00000582308 A0A0C4DFX4 3053 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 BDP1A6H8Y1 2624 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 MUC22E2RYF6 1773 aaPredicted RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 A0A0A0MRY4 1105 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 HACD1B0YJ81 288 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 PRRT4C9JH25 899 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 H7C0C1 242 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 CBX4O00257 560 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 MCF2LO15068 1137 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 PRAMEF11O60813 436 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 KAT7O95251 611 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 CD160O95971 181 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 PEX11BO96011 259 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 RBP3P10745 1247 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 GLULP15104 373 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 VAV1P15498 845 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 CCNCP24863 283 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 ETFBP38117 255 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 CTSOP43234 321 aaPredicted RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 ATP5OP48047 213 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 KCNJ1P48048 391 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 CKAP4Q07065 602 aaKnown RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 SLC45A4Q5BKX6 768 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 FAM182AQ5T1J6 154 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 IL31Q6EBC2 164 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 TTC27Q6P3X3 843 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 DRICH1Q6PGQ1 229 aaPredicted RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 DARS2Q6PI48 645 aaKnown RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 LEKR1Q6ZMV7 388 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 GJD3Q8N144 294 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 ATPAF2Q8N5M1 289 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 C12orf50Q8NA57 414 aaPredicted RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 DCAF4L2Q8NA75 395 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 CCNYQ8ND76 341 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 SPATA4Q8NEY3 305 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 WFIKKN2Q8TEU8 576 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 TFB1MQ8WVM0 346 aaKnown RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 SORCS1Q8WY21 1168 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 MAGOHBQ96A72 148 aaKnown RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 TTC17Q96AE7 1141 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 QKIQ96PU8 341 aaKnown RBP eCLIP9.74□□□□□ -0.85
RFFL-210ENST00000582308 P2RY13Q9BPV8 354 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 BRD8Q9H0E9 1235 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 L2HGDHQ9H9P8 463 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 PDFQ9HBH1 243 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 USP29Q9HBJ7 922 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 HOMER3Q9NSC5 361 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 RBM12Q9NTZ6 932 aaKnown RBP9.74□□□□□ -0.85
RFFL-210ENST00000582308 VPS51Q9UID3 782 aa9.74□□□□□ -0.85
RFFL-210ENST00000582308 CKAP5Q14008 2032 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 GOLGA6L10A0A0M3HER8 536 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 BCLAF3A2AJT9 711 aaKnown RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 ANTXRLA6NF34 631 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 PPP1R12AO14974 1030 aaPredicted RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 PHF2O75151 1096 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 MT-CO1P00395 513 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 APODP05090 189 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 ITGAVP06756 1048 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 CHRM1P11229 460 aaPredicted RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 POLR2EP19388 210 aaKnown RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 RBL1P28749 1068 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 COILP38432 576 aaPredicted RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 GRIA2P42262 883 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 CLCN6P51797 869 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 ARF5P84085 180 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 ZNF33AQ06730 810 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 IL10RBQ08334 325 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 AP1B1Q10567 949 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 BYSLQ13895 437 aaKnown RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 PON2Q15165 354 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 MLF2Q15773 248 aaPredicted RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 KCTD19Q17RG1 926 aaPredicted RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 TMEM196Q5HYL7 178 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 MBLAC2Q68D91 279 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 LINGO4Q6UY18 593 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 TPRG1Q6ZUI0 275 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 ZNF354CQ86Y25 554 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.73□□□□□ -0.85
RFFL-210ENST00000582308 CCDC13Q8IYE1 715 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 AHI1Q8N157 1196 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 TERB1Q8NA31 727 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 CYB5D2Q8WUJ1 264 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 EZH1Q92800 747 aaPredicted RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 FATE1Q969F0 183 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 ZNF419Q96HQ0 510 aaPredicted RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 TMEM121Q9BTD3 319 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 C2orf49Q9BVC5 232 aaPredicted RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 CARD6Q9BX69 1037 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 DDX47Q9H0S4 455 aaKnown RBP9.73□□□□□ -0.85
RFFL-210ENST00000582308 SP110Q9HB58 689 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 ELOVL2Q9NXB9 296 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 MUTYHQ9UIF7 546 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 HCN2Q9UL51 889 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 CA14Q9ULX7 337 aa9.73□□□□□ -0.85
RFFL-210ENST00000582308 HPCAL4Q9UM19 191 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms