RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FSBPO95073 299 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 ADRA1DP25100 572 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 KPNA1P52294 538 aaPredicted RBP23.12■■□□□ 1.29
CCDC47-204ENST00000582252 EFEMP1Q12805 493 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 RTP2Q5QGT7 225 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 KLHDC8BQ8IXV7 354 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 GBP7Q8N8V2 638 aaPredicted RBP23.12■■□□□ 1.29
CCDC47-204ENST00000582252 ZNF75CPQ92670 426 aaPredicted RBP23.12■■□□□ 1.29
CCDC47-204ENST00000582252 BTN2A3PQ96KV6 586 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 CDK5RAP1Q96SZ6 601 aaKnown RBP23.12■■□□□ 1.29
CCDC47-204ENST00000582252 GORASP1Q9BQQ3 440 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 SLC39A8Q9C0K1 460 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 IL22Q9GZX6 179 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 TXNDC16Q9P2K2 825 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 RPS6KL1Q9Y6S9 549 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 EDF1O60869 148 aaKnown RBP23.11■■□□□ 1.29
CCDC47-204ENST00000582252 USP1O94782 785 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 CRADDP78560 199 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 CDH17Q12864 832 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 AFMIDQ63HM1 303 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 RNF19BQ6ZMZ0 732 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 FAM47EQ6ZV65 393 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 TRIM42Q8IWZ5 723 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 TTC9BQ8N6N2 239 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 ACMSDQ8TDX5 336 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 BCL7CQ8WUZ0 217 aaPredicted RBP23.11■■□□□ 1.29
CCDC47-204ENST00000582252 B3GALT6Q96L58 329 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 FCRL5Q96RD9 977 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 IL12RB2Q99665 862 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 MLPHQ9BV36 600 aaPredicted RBP23.11■■□□□ 1.29
CCDC47-204ENST00000582252 ZFATQ9P243 1243 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 GRID1Q9ULK0 1009 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 LAMA2P24043 3122 aaKnown RBP23.11■■□□□ 1.29
CCDC47-204ENST00000582252 MAFKO60675 156 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 RHOQP17081 205 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 PPM1AP35813 382 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 NDST2P52849 883 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 TAF10Q12962 218 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 RASSF3Q86WH2 238 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 HERC6Q8IVU3 1022 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 SLC39A11Q8N1S5 342 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCDC47-204ENST00000582252 STKLD1Q8NE28 680 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 CERS2Q96G23 380 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 TMEM169Q96HH4 297 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 TRIM56Q9BRZ2 755 aaKnown RBP23.11■■□□□ 1.29
CCDC47-204ENST00000582252 ZYG11BQ9C0D3 744 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 MARCH2Q9P0N8 246 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 SLC17A7Q9P2U7 560 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 SLC27A5Q9Y2P5 690 aa23.11■■□□□ 1.29
CCDC47-204ENST00000582252 EFEMP2O95967 443 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 GSTA1P08263 222 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 DHRS4L1P0CG22 281 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 GEMP55040 296 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 USP41Q3LFD5 358 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 C10orf120Q5SQS8 335 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 PIK3R6Q5UE93 754 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 FYB2Q5VWT5 728 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 RNF43Q68DV7 783 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 FIBCD1Q8N539 461 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 ZSCAN18Q8TBC5 510 aaPredicted RBP23.1■■□□□ 1.29
CCDC47-204ENST00000582252 SRPK1Q96SB4 655 aaKnown RBP23.1■■□□□ 1.29
CCDC47-204ENST00000582252 PIH1D1Q9NWS0 290 aaKnown RBP23.1■■□□□ 1.29
CCDC47-204ENST00000582252 PRKAG3Q9UGI9 489 aa23.1■■□□□ 1.29
CCDC47-204ENST00000582252 FAM237BA0A1B0GVD1 139 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 UGT1A9O60656 530 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 RFPL1O75677 317 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 NEFHP12036 1026 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 ETV4P43268 484 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 LIG3P49916 1009 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 RING1Q06587 406 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 ACTN3Q08043 901 aaPredicted RBP23.09■■□□□ 1.29
CCDC47-204ENST00000582252 PACS1Q6VY07 963 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 C14orf80Q86SX3 495 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 RNF168Q8IYW5 571 aaPredicted RBP23.09■■□□□ 1.29
CCDC47-204ENST00000582252 FATE1Q969F0 183 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 ZNF669Q96BR6 464 aaPredicted RBP23.09■■□□□ 1.29
CCDC47-204ENST00000582252 FAM111AQ96PZ2 611 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 RAD9AQ99638 391 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 CPNE1Q99829 537 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 RASSF4Q9H2L5 321 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 MANSC1Q9H8J5 431 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 UGT1A7Q9HAW7 530 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 UGT1A10Q9HAW8 530 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 UGT1A8Q9HAW9 530 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 GLOD4Q9HC38 313 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 HAUS2Q9NVX0 235 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 TMEM248Q9NWD8 314 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 SPG21Q9NZD8 308 aa23.09■■□□□ 1.29
CCDC47-204ENST00000582252 TUFMP49411 452 aaKnown RBP23.08■■□□□ 1.29
CCDC47-204ENST00000582252 DUSP4Q13115 394 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 BMPR2Q13873 1038 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 MS4A13Q5J8X5 152 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 GRTP1Q5TC63 336 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 MROH9Q5TGP6 573 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 TMEM135Q86UB9 458 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 UMODL1-AS1Q8N2C9 162 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 MICALL1Q8N3F8 863 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 FBXO22Q8NEZ5 403 aa23.08■■□□□ 1.29
CCDC47-204ENST00000582252 USP33Q8TEY7 942 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms