RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 GALNT2Q10471 571 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 SEMA5AQ13591 1074 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 KCNC3Q14003 757 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 RAB33AQ14088 237 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 PABPC1LQ4VXU2 614 aaKnown RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 TEX44Q53QW1 395 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 RABGAP1LQ5R372 815 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 TTC19Q6DKK2 380 aaPredicted RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 RSPO2Q6UXX9 243 aaPredicted RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 CCDC149Q6ZUS6 474 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 LINC00523Q86TU6 105 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 CNPY4Q8N129 248 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 ZNF567Q8N184 647 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 PDCD7Q8N8D1 485 aaKnown RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 AUTS2Q8WXX7 1259 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 CDKL2Q92772 493 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 TLCD1Q96CP7 247 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 STAMBPL1Q96FJ0 436 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 RPRD1AQ96P16 312 aaPredicted RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 AGAP3Q96P47 875 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 GCNAQ96QF7 691 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 SMC6Q96SB8 1091 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 NAT9Q9BTE0 207 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 TTLL2Q9BWV7 592 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 PPANQ9NQ55 473 aaKnown RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 EIF2B3Q9NR50 452 aaKnown RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 INTS9Q9NV88 658 aaKnown RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 BFARQ9NZS9 450 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 IGSF9Q9P2J2 1179 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 VANGL2Q9ULK5 521 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 AAR2Q9Y312 384 aaKnown RBP9.5□□□□□ -0.89
SS18-220ENST00000582092 HS3ST4Q9Y661 456 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 FAM169AQ9Y6X4 670 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 A0A0C4DFX4 3053 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 CLUHO75153 1309 aa9.5□□□□□ -0.89
SS18-220ENST00000582092 PLXNA3P51805 1871 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 TYW5A2RUC4 315 aaKnown RBP9.49□□□□□ -0.89
SS18-220ENST00000582092 ERICH4A6NGS2 130 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 ADAM12O43184 909 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 DCXO43602 365 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 BANF1O75531 89 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 TMEM63AO94886 807 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 ABLIM3O94929 683 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 MT-ND3P03897 115 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 CCNB1P14635 433 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 BRAFP15056 766 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 VAV1P15498 845 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 PTPN3P26045 913 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 PSMB4P28070 264 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 SSTR1P30872 391 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 RENBPP51606 427 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 IRAK1P51617 712 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 CLCN4P51793 760 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 NDST2P52849 883 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 SESN2P58004 480 aaPredicted RBP9.49□□□□□ -0.89
SS18-220ENST00000582092 GUCY1A3Q02108 690 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 ITKQ08881 620 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 FASTKD3Q14CZ7 662 aaKnown RBP9.49□□□□□ -0.89
SS18-220ENST00000582092 RARS2Q5T160 578 aaKnown RBP9.49□□□□□ -0.89
SS18-220ENST00000582092 EMC10Q5UCC4 262 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 RAP1GAP2Q684P5 730 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 NAPEPLDQ6IQ20 393 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 LRRC8BQ6P9F7 803 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 SYCE2Q6PIF2 218 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 TDRPQ86YL5 185 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 CCDC117Q8IWD4 279 aaPredicted RBP9.49□□□□□ -0.89
SS18-220ENST00000582092 SRRM1Q8IYB3 904 aaKnown RBP9.49□□□□□ -0.89
SS18-220ENST00000582092 LGI2Q8N0V4 545 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 PLCD3Q8N3E9 789 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 BBS5Q8N3I7 341 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 ZNF276Q8N554 614 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 RTL3Q8N8U3 475 aaKnown RBP9.49□□□□□ -0.89
SS18-220ENST00000582092 NETO2Q8NC67 525 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 VN1R2Q8NFZ6 395 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 USP33Q8TEY7 942 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 SLC22A17Q8WUG5 538 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 SUSD6Q92537 303 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 PLD4Q96BZ4 506 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 SLC39A13Q96H72 371 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 CLSTN3Q9BQT9 956 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 APOL5Q9BWW9 433 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 CEP41Q9BYV8 373 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 CCSER2Q9H7U1 834 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 SP110Q9HB58 689 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 RXFP1Q9HBX9 757 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 ANLNQ9NQW6 1124 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 OSER1Q9NX31 292 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 TXNDC16Q9P2K2 825 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 PPARGC1AQ9UBK2 798 aaKnown RBP9.49□□□□□ -0.89
SS18-220ENST00000582092 FETUBQ9UGM5 382 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 LGALS13Q9UHV8 139 aa9.49□□□□□ -0.89
SS18-220ENST00000582092 VWA8A3KMH1 1905 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 PTPRDP23468 1912 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 REV3LO60673 3130 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 MAGEB16A2A368 324 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 MATN3O15232 486 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 TEX28O15482 410 aa9.48□□□□□ -0.89
SS18-220ENST00000582092 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
SS18-220ENST00000582092 LILRB3O75022 631 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms