RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 SLC12A1Q13621 1099 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 KRT39Q6A163 491 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 USP53Q70EK8 1073 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 IRGQQ8WZA9 623 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 EXTL1Q92935 676 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 EXOC1Q9NV70 894 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 DNAJC28Q9NX36 388 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 SEPT3Q9UH03 358 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 PPM1HQ9ULR3 514 aa15.12■□□□□ 0.01
IFT20-211ENST00000580991 SPTBN1Q01082 2364 aaKnown RBP15.12■□□□□ 0.01
IFT20-211ENST00000580991 A0A1W2PQU0 124 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 ALOX15BO15296 676 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 KLRC4O43908 158 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 LTFP02788 710 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 HNRNPA2B1P22626 353 aaKnown RBP15.11■□□□□ 0.01
IFT20-211ENST00000580991 NR2F2P24468 414 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 GTF2H1P32780 548 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 TAS2R38P59533 333 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 CDKN3Q16667 212 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 EFL1Q7Z2Z2 1120 aaKnown RBP15.11■□□□□ 0.01
IFT20-211ENST00000580991 DCP2Q8IU60 420 aaKnown RBP15.11■□□□□ 0.01
IFT20-211ENST00000580991 SLC22A18ASQ8N1D0 253 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 FBXL13Q8NEE6 735 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 UBA3Q8TBC4 463 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 FAM174AQ8TBP5 190 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 SEMA4DQ92854 862 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 KLK6Q92876 244 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 ARRDC3Q96B67 414 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 SGF29Q96ES7 293 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 FCRL2Q96LA5 508 aaPredicted RBP15.11■□□□□ 0.01
IFT20-211ENST00000580991 SERPINB11Q96P15 392 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 SEMA3CQ99985 751 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 CAAP1Q9H8G2 361 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 WDR70Q9NW82 654 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 TRAF3IP3Q9Y228 551 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 TLR6Q9Y2C9 796 aa15.11■□□□□ 0.01
IFT20-211ENST00000580991 CCDC187A0A096LP49 1063 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 PMS2P1A4D2B8 440 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 EME2A4GXA9 379 aaPredicted RBP15.1■□□□□ 0.01
IFT20-211ENST00000580991 MCF2LO15068 1137 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 GP1BBP13224 206 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 CD19P15391 556 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 ZNF18P17022 549 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 VASPP50552 380 aaPredicted RBP15.1■□□□□ 0.01
IFT20-211ENST00000580991 CCDC15Q0P6D6 951 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 NNTQ13423 1086 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 ZNF284Q2VY69 593 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 ACCSLQ4AC99 568 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 ZNF542PQ5EBM4 170 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 GUSBP11Q6P575 273 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 ABI3BPQ7Z7G0 1075 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 HORMAD1Q86X24 394 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 FAM186BQ8IYM0 893 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 LGI2Q8N0V4 545 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 ZNF548Q8NEK5 533 aaPredicted RBP15.1■□□□□ 0.01
IFT20-211ENST00000580991 WDR48Q8TAF3 677 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 SLC39A13Q96H72 371 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 NOX5Q96PH1 765 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 FZD3Q9NPG1 666 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 RAB20Q9NX57 234 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 CSNK1G3Q9Y6M4 447 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 TRPM6Q9BX84 2022 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 BSNQ9UPA5 3926 aa15.1■□□□□ 0.01
IFT20-211ENST00000580991 RELNP78509 3460 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 UTP20O75691 2785 aaKnown RBP15.09■□□□□ 0.01
IFT20-211ENST00000580991 GOLGA6L3A6NEY3 463 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 A6NNZ2 444 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 H3BM21 787 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 ATP9BO43861 1147 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 MOCS2O96007 188 aaPredicted RBP15.09■□□□□ 0.01
IFT20-211ENST00000580991 FAM87AP0C7U9 286 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 PDGFRAP16234 1089 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
IFT20-211ENST00000580991 PLK1P53350 603 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 CLDN2P57739 230 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 UBAP2LQ14157 1087 aaKnown RBP15.09■□□□□ 0.01
IFT20-211ENST00000580991 NFIL3Q16649 462 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 PIP5KL1Q5T9C9 394 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 GCNT7Q6ZNI0 430 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 Q6ZSR6 202 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 GRAMD1CQ8IYS0 662 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 CEP57L1Q8IYX8 460 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 ERCC4Q92889 916 aaPredicted RBP15.09■□□□□ 0.01
IFT20-211ENST00000580991 SALL4Q9UJQ4 1053 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 KIAA1257Q9ULG3 409 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 MTMR6Q9Y217 621 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 PCDHGA7Q9Y5G6 932 aa15.09■□□□□ 0.01
IFT20-211ENST00000580991 CREBBPQ92793 2442 aa15.08■□□□□ 0.01
IFT20-211ENST00000580991 O00370 1275 aa15.08■□□□□ 0
IFT20-211ENST00000580991 PIK3R2O00459 728 aa15.08■□□□□ 0
IFT20-211ENST00000580991 YEATS4O95619 227 aa15.08■□□□□ 0
IFT20-211ENST00000580991 CSF2P04141 144 aa15.08■□□□□ 0
IFT20-211ENST00000580991 VDRP11473 427 aa15.08■□□□□ 0
IFT20-211ENST00000580991 NME1P15531 152 aaKnown RBP15.08■□□□□ 0
IFT20-211ENST00000580991 TACR2P21452 398 aa15.08■□□□□ 0
IFT20-211ENST00000580991 NUMBP49757 651 aa15.08■□□□□ 0
IFT20-211ENST00000580991 RGS7P49802 495 aa15.08■□□□□ 0
IFT20-211ENST00000580991 MXI1P50539 228 aa15.08■□□□□ 0
IFT20-211ENST00000580991 OXCT1P55809 520 aa15.08■□□□□ 0
IFT20-211ENST00000580991 TLE1Q04724 770 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms