RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 FCRL3Q96P31 734 aaPredicted RBP10.57□□□□□ -0.72
GGA3-210ENST00000580799 INTS2Q9H0H0 1204 aaKnown RBP10.57□□□□□ -0.72
GGA3-210ENST00000580799 ASNSD1Q9NWL6 643 aa10.57□□□□□ -0.72
GGA3-210ENST00000580799 VPS28Q9UK41 221 aa10.57□□□□□ -0.72
GGA3-210ENST00000580799 HS3ST2Q9Y278 367 aa10.57□□□□□ -0.72
GGA3-210ENST00000580799 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
GGA3-210ENST00000580799 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.57□□□□□ -0.72
GGA3-210ENST00000580799 SMG1Q96Q15 3661 aaKnown RBP10.57□□□□□ -0.72
GGA3-210ENST00000580799 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.56□□□□□ -0.72
GGA3-210ENST00000580799 TEX51A0A1B0GUA7 166 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 SIGLEC6O43699 453 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 BRINP1O60477 761 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 HSF2BPO75031 334 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 CD44P16070 742 aaKnown RBP10.56□□□□□ -0.72
GGA3-210ENST00000580799 GNA15P30679 374 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 SNX16P57768 344 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 PITX1P78337 314 aaPredicted RBP10.56□□□□□ -0.72
GGA3-210ENST00000580799 INSM1Q01101 510 aaPredicted RBP10.56□□□□□ -0.72
GGA3-210ENST00000580799 ZNF177Q13360 481 aaPredicted RBP10.56□□□□□ -0.72
GGA3-210ENST00000580799 AUHQ13825 339 aaKnown RBP10.56□□□□□ -0.72
GGA3-210ENST00000580799 TBC1D25Q3MII6 688 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 KLHL10Q6JEL2 608 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 Q6ZVU0 165 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 SLC25A45Q8N413 288 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 SH2D3CQ8N5H7 860 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 TMEM145Q8NBT3 493 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 OR4C6Q8NH72 309 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 FAM174AQ8TBP5 190 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 NELFBQ8WX92 580 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 NOX5Q96PH1 765 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 SLC2A13Q96QE2 648 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 UBE2TQ9NPD8 197 aaPredicted RBP10.56□□□□□ -0.72
GGA3-210ENST00000580799 TBC1D30Q9Y2I9 924 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 OR51B4Q9Y5P0 310 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 HELZ2Q9BYK8 2649 aaKnown RBP10.56□□□□□ -0.72
GGA3-210ENST00000580799 SHROOM3Q8TF72 1996 aa10.56□□□□□ -0.72
GGA3-210ENST00000580799 PPP1R3GB7ZBB8 358 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 TRIM38O00635 465 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 SDC3O75056 442 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 THEGLP0DJG4 465 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 DGKAP23743 735 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 NUMBP49757 651 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 CDH4P55283 916 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 TAS2R38P59533 333 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 KRT83P78385 493 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 DAB2P98082 770 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 CENPCQ03188 943 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 KCNMA1Q12791 1236 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 TAF5Q15542 800 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 C5orf22Q49AR2 442 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 PIP5KL1Q5T9C9 394 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 ISM2Q6H9L7 571 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 GPR155Q7Z3F1 870 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 DEFB106AQ8N104 65 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 TMIEQ8NEW7 156 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 IFT43Q96FT9 208 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 PPP1R13BQ96KQ4 1090 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 C2orf49Q9BVC5 232 aaPredicted RBP10.55□□□□□ -0.72
GGA3-210ENST00000580799 MUC3BQ9H195 1237 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 EVA1BQ9NVM1 165 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 KLHL11Q9NVR0 708 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 TMEM51Q9NW97 253 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 MAN1B1Q9UKM7 699 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 VANGL2Q9ULK5 521 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 RAI2Q9Y5P3 530 aa10.55□□□□□ -0.72
GGA3-210ENST00000580799 SETXQ7Z333 2677 aaKnown RBP10.55□□□□□ -0.72
GGA3-210ENST00000580799 KALRNO60229 2985 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 SYNJ2BP-COX16A0A087WUM0 186 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 A0A1W2PQU0 124 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 NEMP2A6NFY4 417 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 CAPN8A6NHC0 703 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 KPNA3O00505 521 aaPredicted RBP10.54□□□□□ -0.72
GGA3-210ENST00000580799 PAGE1O75459 146 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 FGFR1OPO95684 399 aaKnown RBP10.54□□□□□ -0.72
GGA3-210ENST00000580799 MT-CO3P00414 261 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 PRNPP04156 253 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 GP1BAP07359 652 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 ALPPL2P10696 532 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 CKMT1AP12532 417 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 SRCP12931 536 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 HNRNPA2B1P22626 353 aaKnown RBP10.54□□□□□ -0.72
GGA3-210ENST00000580799 AKT2P31751 481 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 CLCN6P51797 869 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 TLE3Q04726 772 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 PAK1Q13153 545 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 NME3Q13232 169 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 POM121L1PQ3SYA9 428 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 ACBD5Q5T8D3 534 aaPredicted RBP10.54□□□□□ -0.72
GGA3-210ENST00000580799 TRIM65Q6PJ69 517 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 KDM7AQ6ZMT4 941 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 C11orf57Q6ZUT1 292 aaPredicted RBP10.54□□□□□ -0.72
GGA3-210ENST00000580799 SLC26A9Q7LBE3 791 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 HORMAD1Q86X24 394 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 ERICH1Q86X53 443 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 DCP2Q8IU60 420 aaKnown RBP10.54□□□□□ -0.72
GGA3-210ENST00000580799 LSMEM2Q8N112 164 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 ATP11CQ8NB49 1132 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 ZNF248Q8NDW4 579 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 OR52K2Q8NGK3 314 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms